RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CMTM6Q9NX76 183 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 BAG5Q9UL15 447 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 USP22Q9UPT9 525 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 MPDZO75970 2070 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 GSTA4O15217 222 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 FMO6PO60774 539 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 FAM107AO95990 144 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 CGAP01215 116 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 IMPDH2P12268 514 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 CD247P20963 164 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 FPR1P21462 350 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 GTF2E2P29084 291 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 TLE4Q04727 773 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 CEACAM7Q14002 265 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 OR1Q1Q15612 314 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 OR7A5Q15622 319 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 NRF1Q16656 503 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 C1orf140Q5VVS0 124 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 ABLIM2Q6H8Q1 611 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 ZNF474Q6S9Z5 364 aaPredicted RBP16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 C6orf89Q6UWU4 347 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 GPR32P1Q8NGA4 272 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 FAM222BQ8WU58 562 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 MCHR1Q99705 422 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 BCO1Q9HAY6 547 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 PLSCR4Q9NRQ2 329 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 CRIM1Q9NZV1 1036 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 NOTCH2Q04721 2471 aa16.46■□□□□ 0.23
PRPF40B-216ENST00000552301 ZNF724A8MTY0 619 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 TMEM229AB2RXF0 380 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 NME4O00746 187 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 PRF1P14222 555 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 KLK2P20151 261 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 PSME3P61289 254 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 PAQR6Q6TCH4 344 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 C5orf46Q6UWT4 87 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 BEND4Q6ZU67 534 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 GALNT5Q7Z7M9 940 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 ANKS4BQ8N8V4 417 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 PRR14Q9BWN1 585 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 ALG2Q9H553 416 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 ADPRHL2Q9NX46 363 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 C6orf203Q9P0P8 240 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 NDRG3Q9UGV2 375 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 TAGLN3Q9UI15 199 aa16.45■□□□□ 0.22
PRPF40B-216ENST00000552301 A0A0B4J2E0 115 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 A0A1B0GX12 115 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 LIPT2A6NK58 231 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 GPR171O14626 319 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 PCYT1AP49585 367 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 MXRA7P84157 204 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 FAM27E3Q08E93 113 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 PDK3Q15120 406 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 OTUD3Q5T2D3 398 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF613Q6PF04 617 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 NUFIP2Q7Z417 695 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF295-AS1Q8N0V1 137 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 OR6T1Q8NGN1 323 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 LINC01560Q8TB33 94 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 LZICQ8WZA0 190 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 SLC38A4Q969I6 547 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF300Q96RE9 604 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 EPYCQ99645 322 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 KCTD14Q9BQ13 255 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 KLHL4Q9C0H6 718 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 SPAG4Q9NPE6 437 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 ADA2Q9NZK5 511 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 SH3GLB1Q9Y371 365 aa16.44■□□□□ 0.22
PRPF40B-216ENST00000552301 CENPEQ02224 2701 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 CPSF4LA6NMK7 179 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 C16orf97H3BN30 126 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 KDELR2P33947 212 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 GSK3BP49841 420 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 CYBRD1Q53TN4 286 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 C8orf82Q6P1X6 216 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 TFAP2EQ6VUC0 442 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 TMEM200AQ86VY9 491 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 LSRQ86X29 649 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 CARM1Q86X55 608 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 CCDC103Q8IW40 242 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF100Q8IYN0 542 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF775Q96BV0 537 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 SLC25A36Q96CQ1 311 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 TPD52L3Q96J77 140 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 WFDC6Q9BQY6 131 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 FAM53CQ9NYF3 392 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 ADAM21Q9UKJ8 722 aa16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 NOSIPQ9Y314 301 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-216ENST00000552301 IGKV3D-15A0A087WSY6 115 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 SH3D21A4FU49 640 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 CXCR6O00574 342 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 CASKO14936 926 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 OR2T1O43869 369 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 SHOX2O60902 331 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 NPIPB7O75200 414 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 GMNNO75496 209 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 AKR7A3O95154 331 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms