RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SLC1A3P43003 542 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 IDH2P48735 452 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 MAP2K6P52564 334 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 MAD2L1Q13257 205 aaPredicted RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 EFNB3Q15768 340 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 TYW3Q6IPR3 259 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 PAQR6Q6TCH4 344 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 UGT2A3Q6UWM9 527 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 AAED1Q7RTV5 226 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 C4orf33Q8N1A6 199 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 CLEC4FQ8N1N0 589 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 LINC01356Q8N9X3 169 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 OR4A15Q8NGL6 344 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 MIPOL1Q8TD10 442 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 BOD1Q96IK1 185 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 TXLNGYQ9BZA5 131 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 TMEFF2Q9UIK5 374 aaPredicted RBP12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 TMED7Q9Y3B3 224 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 SMIM23A6NLE4 172 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 VSTM5A8MXK1 200 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 OR12D1P0DN82 309 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 IMPDH2P12268 514 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 UQCRBP14927 111 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 PCMT1P22061 227 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 GIFP27352 417 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 APEX1P27695 318 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 IDH3GP51553 393 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 KCNJ10P78508 379 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 ADIPOQQ15848 244 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 OTUD3Q5T2D3 398 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 CLECL1Q8IZS7 167 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 OR9K2Q8NGE7 335 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 XAGE5Q8WWM1 108 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 ROPN1LQ96C74 230 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 TUBGCP3Q96CW5 907 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 C1orf159Q96HA4 380 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 SF3B5Q9BWJ5 86 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 SAP130Q9H0E3 1048 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 PLK3Q9H4B4 646 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 PIF1Q9H611 641 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 PCDHB14Q9Y5E9 798 aa12.35□□□□□ -0.43
CHMP1A-210ENST00000551981 TMEM72A0PK05 275 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 LRP5LA4QPB2 252 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 RNASET2O00584 256 aaKnown RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 SKAP2O75563 359 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 STAMBPO95630 424 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 GPIP06744 558 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 TACSTD2P09758 323 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 G6PDP11413 515 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 DAOP14920 347 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 ALDH3A1P30838 453 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 SERPINB5P36952 375 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 KHKP50053 298 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 CLDN8P56748 225 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 TBRG1Q3YBR2 411 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 GPAT3Q53EU6 434 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 AP1ARQ63HQ0 302 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 OR4F3Q6IEY1 312 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 TNFAIP8L2Q6P589 184 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 CMIPQ8IY22 773 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 OR4F15Q8NGB8 312 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 NEU4Q8WWR8 484 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 RAB8BQ92930 207 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 AURKBQ96GD4 344 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 C3orf30Q96M34 536 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 ZNF317Q96PQ6 595 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 ADAM19Q9H013 955 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 NOP53Q9NZM5 478 aaKnown RBP12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 OSGIN1Q9UJX0 560 aa12.34□□□□□ -0.43
CHMP1A-210ENST00000551981 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.43
CHMP1A-210ENST00000551981 OR6C65A6NJZ3 312 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 LGI1O95970 557 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 SHBGP04278 402 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 UQCRC2P22695 453 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 CFPP27918 469 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 TACR3P29371 465 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 NAAAQ02083 359 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 EMX2Q04743 252 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 GNA13Q14344 377 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 ZSWIM7Q19AV6 140 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 ANKRD16Q6P6B7 361 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 GPAT4Q86UL3 456 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 VPS37AQ8NEZ2 397 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 CNOT9Q92600 299 aaKnown RBP12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 APOPT1Q96IL0 206 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 ZNF385AQ96PM9 386 aaKnown RBP12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 SNX18Q96RF0 628 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 PLA2G12AQ9BZM1 189 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms