RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TYROBPO43914 113 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 MYZAPP0CAP1 466 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 IGHV4-31P0DP07 118 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 IMPDH2P12268 514 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 UQCRBP14927 111 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 CHI3L1P36222 383 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-221ENST00000550914 GZMKP49863 264 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 ANXA11P50995 505 aaKnown RBP11.25□□□□□ -0.61
PTCH1-221ENST00000550914 PRPS1P60891 318 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 IFFO1Q0D2I5 559 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 GNA13Q14344 377 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 GPAT3Q53EU6 434 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 ABHD12BQ7Z5M8 362 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-221ENST00000550914 ANKRD46Q86W74 232 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 POMGNT2Q8NAT1 580 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 CNOT9Q92600 299 aaKnown RBP11.25□□□□□ -0.61
PTCH1-221ENST00000550914 CCDC115Q96NT0 180 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 SLC35A5Q9BS91 424 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 SHARPINQ9H0F6 387 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 MANSC1Q9H8J5 431 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 MARCOQ9UEW3 520 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-221ENST00000550914 OSGIN1Q9UJX0 560 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 FKBP7Q9Y680 259 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 TMEM72A0PK05 275 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 PRAMEF27A3QJZ7 478 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 CLDN24A6NM45 220 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 BIRC5O15392 142 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 SERPINE1P05121 402 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 RPS4Y1P22090 263 aaKnown RBP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 TACR3P29371 465 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 SLC25A3Q00325 362 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 PDCD2Q16342 344 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 GSTA3Q16772 222 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 SWI5Q1ZZU3 235 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 KLHL24Q6TFL4 600 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 LRRC74BQ6ZQY2 392 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF440Q8IYI8 595 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 TRIML2Q8N7C3 387 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF781Q8N8C0 355 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 HTRA1Q92743 480 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 C1QTNF6Q9BXI9 259 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 SLC38A1Q9H2H9 487 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 MTHFD2LQ9H903 347 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 MOV10Q9HCE1 1003 aaKnown RBP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 MYOZ1Q9NP98 299 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-221ENST00000550914 BTNL2Q9UIR0 455 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 RAP2CQ9Y3L5 183 aa11.24□□□□□ -0.61
PTCH1-221ENST00000550914 CFAP73A6NFT4 308 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 OR6C65A6NJZ3 312 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 E9PBE3 544 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 ATP6V1G2-DDX39BF2Z307 99 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 AP3D1O14617 1153 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 LMX1BO60663 402 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 GPIP06744 558 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 CREB1P16220 341 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 CCNA2P20248 432 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 S100A3P33764 101 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 PDLIM4P50479 330 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 RPL14P50914 215 aaKnown RBP11.23□□□□□ -0.61
PTCH1-221ENST00000550914 ABCE1P61221 599 aaKnown RBP11.23□□□□□ -0.61
PTCH1-221ENST00000550914 LRRC74AQ0VAA2 488 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 EPS8Q12929 822 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 MST1LQ2TV78 715 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 C3orf36Q3SXR2 165 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 FAM174BQ3ZCQ3 159 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 SPANXN4Q5MJ08 99 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 OTUD3Q5T2D3 398 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-221ENST00000550914 C9orf135Q5VTT2 229 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 OGFOD2Q6N063 350 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 ZIC4Q8N9L1 334 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 OR9K2Q8NGE7 335 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 WDR60Q8WVS4 1066 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 DNAJA3Q96EY1 480 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF317Q96PQ6 595 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-221ENST00000550914 TMEM109Q9BVC6 243 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 HAO1Q9UJM8 370 aa11.23□□□□□ -0.61
PTCH1-221ENST00000550914 FBXO9Q9UK97 447 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-221ENST00000550914 ZC3H12DA2A288 527 aaKnown RBP11.22□□□□□ -0.61
PTCH1-221ENST00000550914 LIPT2A6NK58 231 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 AQP7P3A6NL99 342 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 ITM2AO43736 263 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 PDE5AO76074 875 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 VAMP5O95183 116 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 DBIP07108 87 aaKnown RBP11.22□□□□□ -0.61
PTCH1-221ENST00000550914 CHRM4P08173 479 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 IL7RP16871 459 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF16P17020 682 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-221ENST00000550914 LBPP18428 481 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 NR4A2P43354 598 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 SNRPD2P62316 118 aaKnown RBP11.22□□□□□ -0.61
PTCH1-221ENST00000550914 SYPL1Q16563 259 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 FAM166AQ6J272 317 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 AAED1Q7RTV5 226 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 HMGN2P46Q86SG4 172 aa11.22□□□□□ -0.61
PTCH1-221ENST00000550914 RNF130Q86XS8 419 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms