RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 HTR1FP30939 366 aa15.05■□□□□ -0
CUX1-213ENST00000549414 GLO1Q04760 184 aa15.05■□□□□ -0
CUX1-213ENST00000549414 EEF1A2Q05639 463 aaKnown RBP15.05■□□□□ -0
CUX1-213ENST00000549414 CBFBQ13951 182 aa15.05■□□□□ -0
CUX1-213ENST00000549414 NKPD1Q17RQ9 610 aa15.05■□□□□ -0
CUX1-213ENST00000549414 PRAMEF20Q5VT98 475 aa15.05■□□□□ -0
CUX1-213ENST00000549414 NLRP8Q86W28 1048 aa15.05■□□□□ -0
CUX1-213ENST00000549414 UEVLDQ8IX04 471 aa15.05■□□□□ -0
CUX1-213ENST00000549414 BAHD1Q8TBE0 780 aaPredicted RBP15.05■□□□□ -0
CUX1-213ENST00000549414 THRSPQ92748 146 aa15.05■□□□□ -0
CUX1-213ENST00000549414 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
CUX1-213ENST00000549414 SYT4Q9H2B2 425 aa15.05■□□□□ -0
CUX1-213ENST00000549414 GALR3O60755 368 aaPredicted RBP15.05■□□□□ -0
CUX1-213ENST00000549414 UTS2O95399 124 aa15.05■□□□□ -0
CUX1-213ENST00000549414 IFNA7P01567 189 aa15.05■□□□□ -0
CUX1-213ENST00000549414 AFF3P51826 1226 aaKnown RBP15.05■□□□□ -0
CUX1-213ENST00000549414 AGAP6Q5VW22 663 aa15.05■□□□□ -0
CUX1-213ENST00000549414 TMEM53Q6P2H8 277 aa15.05■□□□□ -0
CUX1-213ENST00000549414 TMEM17Q86X19 198 aa15.05■□□□□ -0
CUX1-213ENST00000549414 LRRC20Q8TCA0 184 aa15.05■□□□□ -0
CUX1-213ENST00000549414 FAM46BQ96A09 425 aa15.05■□□□□ -0
CUX1-213ENST00000549414 PNPLA2Q96AD5 504 aa15.05■□□□□ -0
CUX1-213ENST00000549414 AGAP4Q96P64 663 aa15.05■□□□□ -0
CUX1-213ENST00000549414 ZNF701Q9NV72 531 aaPredicted RBP15.05■□□□□ -0
CUX1-213ENST00000549414 SRPK3Q9UPE1 567 aa15.05■□□□□ -0
CUX1-213ENST00000549414 G3V3Y1 287 aa15.04■□□□□ -0
CUX1-213ENST00000549414 MEN1O00255 615 aa15.04■□□□□ -0
CUX1-213ENST00000549414 PAPLNO95428 1278 aa15.04■□□□□ -0
CUX1-213ENST00000549414 PAHP00439 452 aa15.04■□□□□ -0
CUX1-213ENST00000549414 GIFP27352 417 aa15.04■□□□□ -0
CUX1-213ENST00000549414 HSD11B2P80365 405 aa15.04■□□□□ -0
CUX1-213ENST00000549414 VWA2Q5GFL6 755 aa15.04■□□□□ -0
CUX1-213ENST00000549414 PRDM7Q9NQW5 492 aa15.04■□□□□ -0
CUX1-213ENST00000549414 SLC22A7Q9Y694 548 aa15.04■□□□□ -0
CUX1-213ENST00000549414 GPR179Q6PRD1 2367 aa15.04■□□□□ -0
CUX1-213ENST00000549414 TLCD2A6NGC4 264 aa15.04■□□□□ -0
CUX1-213ENST00000549414 NUDT1P36639 197 aa15.04■□□□□ -0
CUX1-213ENST00000549414 FNTBP49356 437 aa15.04■□□□□ -0
CUX1-213ENST00000549414 RIN1Q13671 783 aa15.04■□□□□ -0
CUX1-213ENST00000549414 SWI5Q1ZZU3 235 aa15.04■□□□□ -0
CUX1-213ENST00000549414 ABCA11PQ4W5N1 156 aa15.04■□□□□ -0
CUX1-213ENST00000549414 PRSS41Q7RTY9 318 aa15.04■□□□□ -0
CUX1-213ENST00000549414 SLC7A5P1Q8MH63 180 aa15.04■□□□□ -0
CUX1-213ENST00000549414 NANOGP1Q8N7R0 232 aa15.04■□□□□ -0
CUX1-213ENST00000549414 GALNT6Q8NCL4 622 aa15.04■□□□□ -0
CUX1-213ENST00000549414 OR2T35Q8NGX2 323 aa15.04■□□□□ -0
CUX1-213ENST00000549414 CREB3L1Q96BA8 519 aa15.04■□□□□ -0
CUX1-213ENST00000549414 SLC38A1Q9H2H9 487 aa15.04■□□□□ -0
CUX1-213ENST00000549414 OR14I1A6ND48 311 aa15.04■□□□□ -0
CUX1-213ENST00000549414 HYAL3O43820 417 aaPredicted RBP15.04■□□□□ -0
CUX1-213ENST00000549414 MT-ND4P03905 459 aa15.04■□□□□ -0
CUX1-213ENST00000549414 POU3F4P49335 361 aa15.04■□□□□ -0
CUX1-213ENST00000549414 TATDN3Q17R31 274 aa15.04■□□□□ -0
CUX1-213ENST00000549414 ABHD17BQ5VST6 288 aa15.04■□□□□ -0
CUX1-213ENST00000549414 SLC6A19Q695T7 634 aa15.04■□□□□ -0
CUX1-213ENST00000549414 C8orf82Q6P1X6 216 aaPredicted RBP15.04■□□□□ -0
CUX1-213ENST00000549414 TMEM99Q8N816 258 aa15.04■□□□□ -0
CUX1-213ENST00000549414 RCBTB1Q8NDN9 531 aa15.04■□□□□ -0
CUX1-213ENST00000549414 TM9SF4Q92544 642 aa15.04■□□□□ -0
CUX1-213ENST00000549414 OR14A2Q96R54 314 aa15.04■□□□□ -0
CUX1-213ENST00000549414 CTRCQ99895 268 aa15.04■□□□□ -0
CUX1-213ENST00000549414 PDCD1LG2Q9BQ51 273 aa15.04■□□□□ -0
CUX1-213ENST00000549414 ELOVL3Q9HB03 270 aa15.04■□□□□ -0
CUX1-213ENST00000549414 MED17Q9NVC6 651 aa15.04■□□□□ -0
CUX1-213ENST00000549414 NOX1Q9Y5S8 564 aa15.04■□□□□ -0
CUX1-213ENST00000549414 A0A0A6YYD5 115 aa15.04■□□□□ -0
CUX1-213ENST00000549414 M0R233 179 aa15.04■□□□□ -0
CUX1-213ENST00000549414 S100GP29377 79 aa15.04■□□□□ -0
CUX1-213ENST00000549414 PCGF3Q3KNV8 242 aa15.04■□□□□ -0
CUX1-213ENST00000549414 OTPQ5XKR4 325 aa15.04■□□□□ -0
CUX1-213ENST00000549414 XAF1Q6GPH4 301 aa15.04■□□□□ -0
CUX1-213ENST00000549414 FCRLAQ7L513 359 aa15.04■□□□□ -0
CUX1-213ENST00000549414 LYSMD2Q8IV50 215 aa15.04■□□□□ -0
CUX1-213ENST00000549414 TP53I13Q8NBR0 393 aaPredicted RBP15.04■□□□□ -0
CUX1-213ENST00000549414 INO80EQ8NBZ0 244 aaPredicted RBP15.04■□□□□ -0
CUX1-213ENST00000549414 DYNC2LI1Q8TCX1 351 aa15.04■□□□□ -0
CUX1-213ENST00000549414 DPCDQ9BVM2 203 aaPredicted RBP15.04■□□□□ -0
CUX1-213ENST00000549414 LYRM4Q9HD34 91 aa15.04■□□□□ -0
CUX1-213ENST00000549414 TEX13DA0A0J9YY54 714 aaPredicted RBP15.03■□□□□ -0
CUX1-213ENST00000549414 SCRG1O75711 98 aa15.03■□□□□ -0
CUX1-213ENST00000549414 CHRNB1P11230 501 aa15.03■□□□□ -0
CUX1-213ENST00000549414 GABRG2P18507 467 aa15.03■□□□□ -0
CUX1-213ENST00000549414 ARPC4P59998 168 aa15.03■□□□□ -0
CUX1-213ENST00000549414 S100A10P60903 97 aa15.03■□□□□ -0
CUX1-213ENST00000549414 RACK1P63244 317 aaKnown RBP15.03■□□□□ -0
CUX1-213ENST00000549414 ZNF620Q6ZNG0 422 aa15.03■□□□□ -0
CUX1-213ENST00000549414 MARCH3Q86UD3 253 aa15.03■□□□□ -0
CUX1-213ENST00000549414 FAM26EQ8N5C1 309 aa15.03■□□□□ -0
CUX1-213ENST00000549414 DDIT4LQ96D03 193 aa15.03■□□□□ -0
CUX1-213ENST00000549414 PLA2G12AQ9BZM1 189 aa15.03■□□□□ -0
CUX1-213ENST00000549414 RDH8Q9NYR8 311 aa15.03■□□□□ -0
CUX1-213ENST00000549414 CACNG2Q9Y698 323 aa15.03■□□□□ -0
CUX1-213ENST00000549414 F5H5K5 113 aa15.03■□□□□ -0
CUX1-213ENST00000549414 SYT7O43581 403 aa15.03■□□□□ -0
CUX1-213ENST00000549414 SCGB1D2O95969 90 aa15.03■□□□□ -0
CUX1-213ENST00000549414 COL9A1P20849 921 aa15.03■□□□□ -0
CUX1-213ENST00000549414 CD27P26842 260 aa15.03■□□□□ -0
CUX1-213ENST00000549414 MRPL19P49406 292 aaKnown RBP15.03■□□□□ -0
CUX1-213ENST00000549414 AGERQ15109 404 aa15.03■□□□□ -0
CUX1-213ENST00000549414 OCLNQ16625 522 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms