RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SASH3O75995 380 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 PGM3O95394 542 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 H6PDO95479 791 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 CSTAP01040 98 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 CHRM4P08173 479 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 CSF3P09919 207 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 ZCCHC18P0CG32 403 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 COX5AP20674 150 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 SLC7A1P30825 629 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 MRPL19P49406 292 aaKnown RBP10.72□□□□□ -0.69
DDX54-206ENST00000549271 POLR2JP52435 117 aaKnown RBP10.72□□□□□ -0.69
DDX54-206ENST00000549271 CBFBQ13951 182 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 QPRTQ15274 297 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 RAB35Q15286 201 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 MAPK11Q15759 364 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 SYPL1Q16563 259 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 CR1LQ2VPA4 569 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 C3orf33Q6P1S2 294 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 EIF3MQ7L2H7 374 aaKnown RBP10.72□□□□□ -0.69
DDX54-206ENST00000549271 HMGN2P46Q86SG4 172 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 ZNF619Q8N2I2 560 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 MIER2Q8N344 545 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 TRIML2Q8N7C3 387 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 C3orf56Q8N813 242 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 FAM71CQ8NEG0 241 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 OIT3Q8WWZ8 545 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 ST8SIA1Q92185 356 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 VPS33AQ96AX1 596 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 TRNT1Q96Q11 434 aaKnown RBP10.72□□□□□ -0.69
DDX54-206ENST00000549271 EBF4Q9BQW3 602 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 SLC38A1Q9H2H9 487 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
DDX54-206ENST00000549271 CLDN24A6NM45 220 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 H7C417 338 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 RFXANKO14593 260 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 SMAD9O15198 467 aaKnown RBP10.71□□□□□ -0.69
DDX54-206ENST00000549271 CYP7B1O75881 506 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 VENTXO95231 258 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 KRT75O95678 551 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 UBTFL6P0CB48 400 aaPredicted RBP10.71□□□□□ -0.69
DDX54-206ENST00000549271 TTKP33981 857 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 CDH11P55287 796 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 SESN3P58005 492 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 TXNL4AP83876 142 aaKnown RBP10.71□□□□□ -0.69
DDX54-206ENST00000549271 RASGEF1BQ0VAM2 473 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 PDK3Q15120 406 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 GTDC1Q4AE62 458 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 GPAT3Q53EU6 434 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 PRR31Q5SQ13 230 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 TIMM23BQ5SRD1 257 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 LRRC74BQ6ZQY2 392 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 MSANTD1Q6ZTZ1 278 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 FUNDC1Q8IVP5 155 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 ATP6V1C2Q8NEY4 427 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 SEMA6DQ8NFY4 1073 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 PNPT1Q8TCS8 783 aaKnown RBP10.71□□□□□ -0.69
DDX54-206ENST00000549271 CKAP2Q8WWK9 683 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 GTF2H4Q92759 462 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 RADILQ96JH8 1075 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 CCDC28BQ9BUN5 200 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 QRSL1Q9H0R6 528 aaKnown RBP10.71□□□□□ -0.69
DDX54-206ENST00000549271 TCF7L2Q9NQB0 619 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 ACER3Q9NUN7 267 aa10.71□□□□□ -0.69
DDX54-206ENST00000549271 VWFP04275 2813 aa10.71□□□□□ -0.7
DDX54-206ENST00000549271 ARFGEF3Q5TH69 2177 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 IGKV3D-15A0A087WSY6 115 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 A0A1W2PNR3 127 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 AGAP5A6NIR3 686 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 HOXB9P17482 250 aaPredicted RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 RPS4Y1P22090 263 aaKnown RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 MAGEA8P43361 318 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 CCR4P51679 360 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 AQP5P55064 265 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 KCNJ10P78508 379 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 DEFA6Q01524 100 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 PPA1Q15181 289 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 TIGD2Q4W5G0 525 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 TMPPEQ6ZT21 453 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 GALNT5Q7Z7M9 940 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 TMCO5AQ8N6Q1 288 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 SLC25A43Q8WUT9 341 aaPredicted RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 CNOT9Q92600 299 aaKnown RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 MUCL1Q96DR8 90 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 AURKBQ96GD4 344 aaPredicted RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 ITCHQ96J02 903 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 PAIP1Q9H074 479 aaKnown RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 MTHFD2LQ9H903 347 aaPredicted RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 TPT1P8Q9HAU6 139 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 SLC52A3Q9NQ40 469 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 INTS9Q9NV88 658 aaKnown RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 ARGLU1Q9NWB6 273 aaPredicted RBP10.7□□□□□ -0.7
DDX54-206ENST00000549271 PRSS50Q9UI38 385 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 SLC35A3Q9Y2D2 325 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
DDX54-206ENST00000549271 A0A0A6YYJ9 748 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 IGHV3-15A0A0B4J1V0 119 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 TMEM89A2RUT3 159 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 OR5H1A6NKK0 313 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms