RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DHCR24Q15392 516 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ARHGAP11BQ3KRB8 267 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 RPL13AP3Q6NVV1 102 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 FCRLAQ7L513 359 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 NRROSQ86YC3 692 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 OR4N5Q8IXE1 308 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 RAB42Q8N4Z0 105 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF433Q8N7K0 673 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 OR52B4Q8NGK2 314 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 GRHL3Q8TE85 626 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 HAO2Q9NYQ3 351 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 WSB2Q9NYS7 404 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 NAP1L6A6NFF2 107 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF749O43361 778 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 CREBL2O60519 120 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 CPN1P15169 458 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 EDNRAP25101 427 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 RPS15P62841 145 aaKnown RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 OC90Q02509 493 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 SFTPA1Q8IWL2 248 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 CDK20Q8IZL9 346 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ING5Q8WYH8 240 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 SGTBQ96EQ0 304 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 C10orf90Q96M02 699 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 OR1F2PQ96R84 312 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ZDHHC4Q9NPG8 344 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 MED9Q9NWA0 146 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 TAS2R5Q9NYW4 299 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 AKAP7Q9P0M2 348 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 NTMQ9P121 344 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 MED31Q9Y3C7 131 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 TBC1D3EA0A087X179 549 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TBC1D3KA0A087X1G2 549 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TBC1D3BA6NDS4 549 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TBC1D3FA6NER0 549 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 B3GALNT1O75752 331 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 OR2A4O95047 310 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 PCDH8O95206 1070 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 IFNA16P05015 189 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 CA3P07451 260 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 HNRNPA1P09651 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 LAMP2P13473 410 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 DPP4P27487 766 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 PTH2RP49190 550 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 AP3S2P59780 193 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 AMZ1Q400G9 498 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TMEM52BQ4KMG9 183 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF626Q68DY1 528 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TBC1D3GQ6DHY5 549 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 CACUL1Q86Y37 369 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 LRRC25Q8N386 305 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 KCT2Q8NC54 265 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SLC2A12Q8TD20 617 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SIPA1Q96FS4 1042 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 OR2A7Q96R45 310 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TNFRSF13CQ96RJ3 184 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 DPYSL5Q9BPU6 564 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SPHK1Q9NYA1 384 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 PFDN2Q9UHV9 154 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 KCNK6Q9Y257 313 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 OR1A2Q9Y585 309 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 ANXA2P2A6NMY6 339 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 MTRF1O75570 445 aaKnown RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 RP2O75695 350 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SIX6O95475 246 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 THBS1P07996 1170 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SRMP19623 302 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 S100A11P31949 105 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 CAPZA2P47755 286 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SEC61A1P61619 476 aaKnown RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 C9orf50Q5SZB4 431 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TMIEQ8NEW7 156 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 SNX33Q8WV41 574 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 TTYH1Q9H313 450 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-228ENST00000548938 KLF15Q9UIH9 416 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 FBXL3Q9UKT7 428 aa12.63□□□□□ -0.39
HDAC7-228ENST00000548938 RNGTTO60942 597 aaKnown RBP12.62□□□□□ -0.39
HDAC7-228ENST00000548938 PTP4A3O75365 173 aa12.62□□□□□ -0.39
HDAC7-228ENST00000548938 ITGA10O75578 1167 aa12.62□□□□□ -0.39
HDAC7-228ENST00000548938 P2RX1P51575 399 aa12.62□□□□□ -0.39
HDAC7-228ENST00000548938 PLAURQ03405 335 aa12.62□□□□□ -0.39
HDAC7-228ENST00000548938 POU4F2Q12837 409 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms