RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CDC40O60508 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 TFP02787 698 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 OC90Q02509 493 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 CEP78Q5JTW2 689 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 HEPHL1Q6MZM0 1159 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 JAZF1Q86VZ6 243 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 OR52N1Q8NH53 320 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 SGTBQ96EQ0 304 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 WDFY2Q96P53 400 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 KLHDC3Q9BQ90 382 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 SEMA4CQ9C0C4 833 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 PPP1R3EQ9H7J1 279 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 NOX4Q9NPH5 578 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 SCO2O43819 266 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 KHDRBS3O75525 346 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ATF1P18846 271 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 MLLT3P42568 568 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF85Q03923 595 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 EFR3AQ14156 821 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 LNX2Q8N448 690 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ELSPBP1Q96BH3 223 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ANKRD9Q96BM1 317 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ADAD1Q96M93 576 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 OR10A4Q9H209 315 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ADGRL4Q9HBW9 690 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 ZMIZ1Q9ULJ6 1067 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 FREM2Q5SZK8 3169 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 TEX46H3BTG2 121 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 CTXN1P60606 82 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 RPL6Q02878 288 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 C16orf47Q6ZP98 133 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 SIAH3Q8IW03 269 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 LILRB4Q8NHJ6 448 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 AHCYL2Q96HN2 611 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 NANSQ9NR45 359 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 COPS3Q9UNS2 423 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 KIAA1549LQ6ZVL6 1849 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 C17orf105B2RV13 164 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 TGFBR3LH3BV60 316 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 GATBO75879 557 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 TFPIP10646 304 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 GRK6P43250 576 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 RPS5P46782 204 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 ATP12AP54707 1039 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 BIKQ13323 160 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 MED25Q71SY5 747 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 FCRLAQ7L513 359 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC35F2Q8IXU6 374 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 TSLPQ969D9 159 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 KLHDC7BQ96G42 594 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 TRIM2Q9C040 744 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 ERVMER34-1Q9H9K5 563 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 DUSP22Q9NRW4 184 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 DZANK1Q9NVP4 752 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 OR6C68A6NDL8 312 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 NDUFB2O95178 105 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 RNH1P13489 461 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 HSD17B12Q53GQ0 312 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 HBMQ6B0K9 141 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 C1orf216Q8TAB5 229 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 PELI1Q96FA3 418 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 MCCC2Q9HCC0 563 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 TMEM5Q9Y2B1 443 aa12.55□□□□□ -0.4
PRPF40B-209ENST00000548825 A0A0A6YYJ9 748 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 IGHV3-20A0A0C4DH32 117 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 FAM172BPA6NC97 362 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 OIP5O43482 229 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 DHFRP00374 187 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 DDOSTP39656 456 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 TNFRSF4P43489 277 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 ZP2Q05996 745 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 GAS6Q14393 721 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 NOS1APO75052 506 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 PLAURQ03405 335 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 FAPQ12884 760 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 SNTB2Q13425 540 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 UBXN2BQ14CS0 331 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 TMEM44Q2T9K0 475 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 GARNL3Q5VVW2 1013 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 C1QL3Q5VWW1 255 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 AKAP1Q92667 903 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 FGF11Q92914 225 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 KISS1RQ969F8 398 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 NKD1Q969G9 470 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 MOGAT1Q96PD6 335 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 CACNG2Q9Y698 323 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 FANCMQ8IYD8 2048 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 TSFMP43897 325 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms