RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 C1orf216Q8TAB5 229 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 PHOSPHO1Q8TCT1 267 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 ACOT12Q8WYK0 555 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 GHSRQ92847 366 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 RASD2Q96D21 266 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 CNN2Q99439 309 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 OR8D2Q9GZM6 311 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 UBE2ZQ9H832 354 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 NRIP3Q9NQ35 241 aa16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 DHCR7Q9UBM7 475 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-208ENST00000548436 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 NUP210LQ5VU65 1888 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 FER1L5A0AVI2 2057 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 OR6C68A6NDL8 312 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 B4DXG7 233 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 TMEM150CB9EJG8 249 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 SLC19A2O60779 497 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 IL33O95760 270 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 OR2T7P0C7T2 308 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 PTBP1P26599 531 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 ADH7P40394 386 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 PPICP45877 212 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 CSNK1EP49674 416 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 EFNA3P52797 238 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 NRG3P56975 720 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 ERVK-25P63136 954 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 BIKQ13323 160 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 RSBN1Q5VWQ0 802 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 WBP2NLQ6ICG8 309 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 IL20RBQ6UXL0 311 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 NCCRP1Q6ZVX7 275 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 TMEM151BQ8IW70 566 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 OR2T27Q8NH04 317 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 MOSPD2Q8NHP6 518 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 TP53INP1Q96A56 240 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 KLHDC3Q9BQ90 382 aa16.94■□□□□ 0.3
PRPF40B-208ENST00000548436 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 A0A0G2JK05 382 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 A0A1W2PRG6 482 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ELOA3DA6NLF2 546 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 FAM25AB3EWG3 89 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 FAM25CB3EWG5 89 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 FAM25GB3EWG6 89 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 UBL4AP11441 157 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 HPGDP15428 266 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 NR4A2P43354 598 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 CCR4P51679 360 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 CFHR1Q03591 330 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ELOA3BQ3SY89 546 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ACSM3Q53FZ2 586 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 TRIQKQ629K1 86 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ATG4DQ86TL0 474 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 SLC35F2Q8IXU6 374 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 POMGNT2Q8NAT1 580 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ELOA3Q8NG57 546 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 PELI1Q96FA3 418 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 SLC19A3Q9BZV2 496 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ADAM30Q9UKF2 790 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 MMACHCQ9Y4U1 282 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 PCDHGB7Q9Y5F8 929 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 A0A0C4DFX4 3053 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 COL5A1P20908 1838 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 PCNX3Q9H6A9 2034 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 IGKV3D-11A0A0A0MRZ8 115 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 C4orf47A7E2U8 309 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ARPC3O15145 178 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 UTS2O95399 124 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 MST1P26927 711 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 RPS5P46782 204 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 DIO1P49895 249 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 EPHA4P54764 986 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 PON3Q15166 354 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 CCDC85BQ15834 202 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 SFXN4Q6P4A7 337 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 ZNF527Q8NB42 609 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 C19orf18Q8NEA5 215 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 SLC46A1Q96NT5 459 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 TMEM43Q9BTV4 400 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 NMNAT2Q9BZQ4 307 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 RASD1Q9Y272 281 aa16.93■□□□□ 0.3
PRPF40B-208ENST00000548436 SCDO00767 359 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 OGG1O15527 345 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 SELENOFO60613 162 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 PIAS2O75928 621 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 DDAH2O95865 285 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 IGKV3-11P04433 115 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 SPI1P17947 270 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 MYL9P24844 172 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 LYPD4Q6UWN0 246 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 PRR22Q8IZ63 422 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 OR14A16Q8NHC5 309 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 ZNF721Q8TF20 911 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 ADIPOR1Q96A54 375 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 MOGAT1Q96PD6 335 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 UBL7Q96S82 380 aaPredicted RBP16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 PCED1AQ9H1Q7 454 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 ENAMQ9NRM1 1142 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 EXTL2Q9UBQ6 330 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 COPS3Q9UNS2 423 aa16.92■□□□□ 0.3
PRPF40B-208ENST00000548436 IGHV1OR21-1A0A087WYE8 117 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms