RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 DSPPQ9NZW4 1301 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 CSPG4Q6UVK1 2322 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 E7EQL1 145 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 EIF1BO60739 113 aaKnown RBP11.73□□□□□ -0.53
CPSF6-204ENST00000547486 ZCCHC18P0CG32 403 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 ACVR1BP36896 505 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 CRATP43155 626 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 ZNF83P51522 516 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 BNIP2Q12982 314 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 CEACAM7Q14002 265 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 GNA13Q14344 377 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 GSTA3Q16772 222 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 RPS26P11Q5JNZ5 115 aaPredicted RBP11.73□□□□□ -0.53
CPSF6-204ENST00000547486 TSPO2Q5TGU0 170 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 C9orf135Q5VTT2 229 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 DNM1P46Q6ZS02 220 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 TMEM99Q8N816 258 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 NAA11Q9BSU3 229 aaPredicted RBP11.73□□□□□ -0.53
CPSF6-204ENST00000547486 RSPO3Q9BXY4 272 aaPredicted RBP11.73□□□□□ -0.53
CPSF6-204ENST00000547486 SLCO5A1Q9H2Y9 848 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 ZIM2Q9NZV7 527 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 P2RX2Q9UBL9 471 aa11.73□□□□□ -0.53
CPSF6-204ENST00000547486 CADP27708 2225 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
CPSF6-204ENST00000547486 UBDO15205 165 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 AKR7A3O95154 331 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 ANP32DO95626 131 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 BCHEP06276 602 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 NUDT7P0C024 238 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 CD40P25942 277 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 IDUAP35475 653 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 POLR2JP52435 117 aaKnown RBP11.72□□□□□ -0.53
CPSF6-204ENST00000547486 MAP2K6P52564 334 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 CDH11P55287 796 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 DSTNP60981 165 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 SLC25A3Q00325 362 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 VEZF1Q14119 521 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 BEND6Q5SZJ8 279 aaPredicted RBP11.72□□□□□ -0.53
CPSF6-204ENST00000547486 PAQR6Q6TCH4 344 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 DTX2Q86UW9 622 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 GTF2H4Q92759 462 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 ITCHQ96J02 903 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 ZNF385AQ96PM9 386 aaKnown RBP11.72□□□□□ -0.53
CPSF6-204ENST00000547486 REG4Q9BYZ8 158 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 NKIRAS1Q9NYS0 192 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 TAS2R16Q9NYV7 291 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 ZNF443Q9Y2A4 671 aaPredicted RBP11.72□□□□□ -0.53
CPSF6-204ENST00000547486 B3GALT5Q9Y2C3 310 aa11.72□□□□□ -0.53
CPSF6-204ENST00000547486 KLF11O14901 512 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 CXCR1P25024 350 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 PTAFRP25105 342 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 P2RY4P51582 365 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 CRISP3P54108 245 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 HOXC5Q00444 222 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 OR7A5Q15622 319 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 ETFDHQ16134 617 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 LIN52Q52LA3 116 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 OTUD3Q5T2D3 398 aaPredicted RBP11.71□□□□□ -0.53
CPSF6-204ENST00000547486 WBP2NLQ6ICG8 309 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 OR7E24Q6IFN5 339 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 SLC2A7Q6PXP3 512 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 EPGNQ6UW88 154 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 B3GLCTQ6Y288 498 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 SSX8Q7RTT4 187 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 MIER2Q8N344 545 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 CADM2Q8N3J6 435 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 OR9K2Q8NGE7 335 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 MAL2Q969L2 176 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 TMEM19Q96HH6 336 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 RADILQ96JH8 1075 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 AMBRA1Q9C0C7 1298 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 PAIP1Q9H074 479 aaKnown RBP11.71□□□□□ -0.53
CPSF6-204ENST00000547486 RMND5AQ9H871 391 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 PARPBPQ9NWS1 579 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 CALML5Q9NZT1 146 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 PCDHB14Q9Y5E9 798 aa11.71□□□□□ -0.53
CPSF6-204ENST00000547486 ABCA2Q9BZC7 2435 aa11.71□□□□□ -0.54
CPSF6-204ENST00000547486 A0A0G2JPF8 293 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 FAM234BA2RU67 622 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 HNRNPCL2B2RXH8 293 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 HNRNPCL3B7ZW38 293 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 M0R1B8 84 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 HNRNPCL1O60812 293 aaKnown RBP11.7□□□□□ -0.54
CPSF6-204ENST00000547486 GPIP06744 558 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 HNRNPCL4P0DMR1 293 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 UQCRBP14927 111 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 HOXB9P17482 250 aaPredicted RBP11.7□□□□□ -0.54
CPSF6-204ENST00000547486 TTKP33981 857 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 IRX1P78414 480 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms