RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 UBOX5O94941 541 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 LYPD3O95274 346 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 SERPINA1P01009 418 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 CGAP01215 116 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 CD8BP10966 210 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 BMP5P22003 454 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 IDUAP35475 653 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 BNIP2Q12982 314 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 PAQR6Q6TCH4 344 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 MCEMP1Q8IX19 187 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 GCNT2Q8N0V5 402 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 RNF148Q8N7C7 305 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 RELL2Q8NC24 303 aaPredicted RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 VANGL1Q8TAA9 524 aaPredicted RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 POP5Q969H6 163 aaKnown RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 FAM162AQ96A26 154 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 ZNF426Q9BUY5 554 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 SLC19A3Q9BZV2 496 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 UCK2Q9BZX2 261 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 MUC13Q9H3R2 512 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 KLHL9Q9P2J3 617 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 ING1Q9UK53 422 aaPredicted RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 PACSIN3Q9UKS6 424 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 SAMD4AQ9UPU9 718 aaKnown RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 EMC9Q9Y3B6 208 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 IGKV1D-42A0A075B6H8 117 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 A8MXE2 369 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 FTCDNL1E5RQL4 147 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 MSTNO14793 375 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 OR5F1O95221 314 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 PLGP00747 810 aaPredicted RBP12.91□□□□□ -0.34
DDX54-203ENST00000546869 IGF2P01344 180 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 THY1P04216 161 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 YES1P07947 543 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 NCK1P16333 377 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 PEX19P40855 299 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 ASCL1P50553 236 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 SLC16A1P53985 500 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 BNIP1Q12981 228 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 MFSD13AQ14CX5 517 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 IFI44LQ53G44 452 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 FAM69AQ5T7M9 428 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 ABLIM2Q6H8Q1 611 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 FAM156AQ8NDB6 213 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 PIGXQ8TBF5 258 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 GEMIN6Q8WXD5 167 aaKnown RBP12.91□□□□□ -0.34
DDX54-203ENST00000546869 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 TPD52L3Q96J77 140 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 EPYCQ99645 322 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 PSD2Q9BQI7 771 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 PTDSS2Q9BVG9 487 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 SF3B5Q9BWJ5 86 aaKnown RBP12.91□□□□□ -0.34
DDX54-203ENST00000546869 TAPBPLQ9BX59 468 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 ENKD1Q9H0I2 346 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 SNX13Q9Y5W8 968 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 PCNX1Q96RV3 2341 aa12.91□□□□□ -0.34
DDX54-203ENST00000546869 KIAA1549Q9HCM3 1950 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 TRAV36DV7A0A075B6V5 113 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 NKX2-6A6NCS4 301 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 CPSF4LA6NMK7 179 aaKnown RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 ZNF716A6NP11 495 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 PRSS44E7EML9 344 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 ATP5HO75947 161 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 VAMP5O95183 116 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 AHSA1O95433 338 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 ZNF682O95780 498 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 IFNW1P05000 195 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 IGFBP2P18065 325 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 TCN1P20061 433 aaPredicted RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 FPR1P21462 350 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 RBM34P42696 430 aaKnown RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 OR1E2P47887 323 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 CTBP2P56545 445 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 OR2B6P58173 313 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 RASGEF1BQ0VAM2 473 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 TRIM25Q14258 630 aaKnown RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 DNAL1Q4LDG9 190 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 MTX3Q5HYI7 312 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 SP5Q6BEB4 398 aaPredicted RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 FKBP9P1Q75LS8 142 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 VTCN1Q7Z7D3 282 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 TSPYL5Q86VY4 417 aaPredicted RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
DDX54-203ENST00000546869 SLC41A3Q96GZ6 507 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 HSH2DQ96JZ2 352 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 HS6ST2Q96MM7 605 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 SPOCK3Q9BQ16 436 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 ACTR3BQ9P1U1 418 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 RIMS3Q9UJD0 308 aa12.9□□□□□ -0.34
DDX54-203ENST00000546869 DOCK7Q96N67 2140 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 A1L4Q6 167 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms