RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 IER3IP1Q9Y5U9 82 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF587BE7ETH6 402 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 KNG1P01042 644 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CSF2RAP15509 400 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CPT2P23786 658 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 FGF9P31371 208 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CTNNB1P35222 781 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 AHRP35869 848 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 WNT7BP56706 349 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CLDN6P56747 220 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CD81P60033 236 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 P2RY14Q15391 338 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 RPE65Q16518 533 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 RPS26P11Q5JNZ5 115 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 SERPINA12Q8IW75 414 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 KATNB1Q9BVA0 655 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 OR11A1Q9GZK7 315 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 FGF20Q9NP95 211 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 EXO1Q9UQ84 846 aaKnown RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 GRXCR1A8MXD5 290 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 MPIG6BO95866 241 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 SERPINA5P05154 406 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 ATXN1LP0C7T5 689 aaKnown RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 AOAHP28039 575 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 HOXC13P31276 330 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 HTD2P86397 168 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 XAF1Q6GPH4 301 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 GPRIN1Q7Z2K8 1008 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 TMPRSS5Q9H3S3 457 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 INIPQ9NRY2 104 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CBLCQ9ULV8 474 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 YARS2Q9Y2Z4 477 aaKnown RBP11.94□□□□□ -0.5
PTCH1-212ENST00000546744 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
PTCH1-212ENST00000546744 CHRM2P08172 466 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 NAGAP17050 411 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 DAP3P51398 398 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 NDUFA6P56556 154 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 Q6ZPB1 254 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 CYB561A3Q8NBI2 242 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 OR4D10Q8NGI6 311 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 DAZLQ92904 295 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 MARVELD3Q96A59 401 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SERINC2Q96SA4 455 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 HCAR1Q9BXC0 346 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SLC25A18Q9H1K4 315 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF442Q9H7R0 627 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 RLIMQ9NVW2 624 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 GAR1Q9NY12 217 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 PCDHGA5Q9Y5G8 931 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 A0A0A6YYJ9 748 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 BLACEA4D250 179 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 LINC00862A6NCI5 91 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SCGB1D1O95968 90 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SERPINE2P07093 398 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 F2RL1P55085 397 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SYT14P1Q58G82 188 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 C5orf46Q6UWT4 87 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 MRPL10Q7Z7H8 261 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SCAMP4Q969E2 229 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 PTCHD1Q96NR3 888 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 C19orf43Q9BQ61 176 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 C19orf25Q9UFG5 118 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 STEAP1Q9UHE8 339 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 A0A0B4J2A0 478 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 GPR171O14626 319 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 DVL2O14641 736 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SIX6O95475 246 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 GALTP07902 379 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 ACSM4P0C7M7 580 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 C5AR1P21730 350 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 TACR3P29371 465 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 CAV3P56539 151 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SERTAD2Q14140 314 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 OTUD1Q5VV17 481 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 BAP18Q8IXM2 172 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 NIPSNAP1Q9BPW8 284 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 MARVELD1Q9BSK0 173 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SLC25A19Q9HC21 320 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SHPKQ9UHJ6 478 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 DOCK1Q14185 1865 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 MYH9P35579 1960 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 A0A1B0GTW7 788 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 TMEM88BA6NKF7 163 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 MSTNO14793 375 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 NUDT21O43809 227 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 FBXO24O75426 580 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 CLEC2LP0C7M8 214 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 LRRC73Q5JTD7 316 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 ENTPD8Q5MY95 495 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF776Q68DI1 518 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SBSNQ6UWP8 590 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 CMTM8Q8IZV2 173 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 SYS1Q8N2H4 156 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 EDAQ92838 391 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms