RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 TNFAIP8L2Q6P589 184 aaPredicted RBP12.58□□□□□ -0.4
USP15-206ENST00000546718 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 ZCCHC23Q6ZST2 131 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 SPATA19Q7Z5L4 167 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.58□□□□□ -0.4
USP15-206ENST00000546718 EPS8L3Q8TE67 593 aaKnown RBP12.58□□□□□ -0.4
USP15-206ENST00000546718 OIT3Q8WWZ8 545 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 RAB8BQ92930 207 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 TMEM45BQ96B21 275 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 ZNF385AQ96PM9 386 aaKnown RBP12.58□□□□□ -0.4
USP15-206ENST00000546718 SLC38A2Q96QD8 506 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 PLA2G12AQ9BZM1 189 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 PLK3Q9H4B4 646 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 MID2Q9UJV3 735 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 OSGIN1Q9UJX0 560 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 TMED7Q9Y3B3 224 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 WDR45Q9Y484 360 aa12.58□□□□□ -0.4
USP15-206ENST00000546718 TMEM72A0PK05 275 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 PRAMEF27A3QJZ7 478 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 B9A039 149 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 PDE5AO76074 875 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 C1QCP02747 245 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 OR4A8P0C604 315 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 OR12D1P0DN82 309 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 GIFP27352 417 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 CFPP27918 469 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 PPOXP50336 477 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 SLC35A1P78382 337 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 EFNB3Q15768 340 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 PAQR6Q6TCH4 344 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 IFT20Q8IY31 132 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 ARFGAP2Q8N6H7 521 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 OR9K2Q8NGE7 335 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 CNOT9Q92600 299 aaKnown RBP12.57□□□□□ -0.4
USP15-206ENST00000546718 ROPN1LQ96C74 230 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 KATNB1Q9BVA0 655 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 SEC61A2Q9H9S3 476 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 EXD2Q9NVH0 621 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
USP15-206ENST00000546718 RNASET2O00584 256 aaKnown RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 ZNF208O43345 1280 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 LILRA1O75019 489 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 STAMBPO95630 424 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 TACSTD2P09758 323 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 TACR3P29371 465 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 CALCRP30988 508 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 HTR3AP46098 478 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 POLR2HP52434 150 aaKnown RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 KCNJ10P78508 379 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 NAAAQ02083 359 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 TBRG1Q3YBR2 411 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 VHLLQ6RSH7 139 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 LINGO2Q7L985 606 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 MYPOPQ86VE0 399 aaPredicted RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 ZNF540Q8NDQ6 660 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 OR4A15Q8NGL6 344 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 XAGE5Q8WWM1 108 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 DDIT4LQ96D03 193 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 SNX18Q96RF0 628 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 OBP2BQ9NPH6 170 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 MKS1Q9NXB0 559 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
USP15-206ENST00000546718 TMEFF2Q9UIK5 374 aaPredicted RBP12.56□□□□□ -0.4
USP15-206ENST00000546718 SCN2BO60939 215 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 AKR7A3O95154 331 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 LGI1O95970 557 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 AGR2O95994 175 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 CRYAAP02489 173 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 IGFBP1P08833 259 aaPredicted RBP12.55□□□□□ -0.4
USP15-206ENST00000546718 CECR9P0C854 216 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 DAOP14920 347 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 APEX1P27695 318 aaKnown RBP12.55□□□□□ -0.4
USP15-206ENST00000546718 CLDN8P56748 225 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 TUBA1BP68363 451 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 TUBA4AP68366 448 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 ATAD3BQ5T9A4 648 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 SAXO2Q658L1 398 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 ANKRD16Q6P6B7 361 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 TUBA1AQ71U36 451 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 AAED1Q7RTV5 226 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 ANKRD46Q86W74 232 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 HOMEZQ8IX15 550 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 ZCCHC24Q8N2G6 241 aaKnown RBP12.55□□□□□ -0.4
USP15-206ENST00000546718 TMEM99Q8N816 258 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 POMGNT2Q8NAT1 580 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 SEMA6DQ8NFY4 1073 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 OR1K1Q8NGR3 316 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 HPS1Q92902 700 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 TUBGCP3Q96CW5 907 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 AURKBQ96GD4 344 aaPredicted RBP12.55□□□□□ -0.4
USP15-206ENST00000546718 APOPT1Q96IL0 206 aa12.55□□□□□ -0.4
USP15-206ENST00000546718 NAA11Q9BSU3 229 aaPredicted RBP12.55□□□□□ -0.4
USP15-206ENST00000546718 ADAM19Q9H013 955 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms