RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 C5orf46Q6UWT4 87 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 COMTD1Q86VU5 262 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 SLC30A8Q8IWU4 369 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 NFKBIDQ8NI38 313 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 THOC1Q96FV9 657 aaKnown RBP13.57□□□□□ -0.24
SSH1-204ENST00000546697 PIP5K1AQ99755 562 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 AMBRA1Q9C0C7 1298 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 ACTR6Q9GZN1 396 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 C12orf49Q9H741 205 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 CACYBPQ9HB71 228 aaKnown RBP13.57□□□□□ -0.24
SSH1-204ENST00000546697 SAR1AQ9NR31 198 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 KLHL14Q9P2G3 628 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 AQP7P3A6NL99 342 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 BBIP1A8MTZ0 92 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 FRS3O43559 492 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 FMO6PO60774 539 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 RAMP1O60894 148 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 GPIP06744 558 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 TFPIP10646 304 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 CD53P19397 219 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 CXCR1P25024 350 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 EDNRAP25101 427 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 IDUAP35475 653 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 NR1H2P55055 460 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 EGR4Q05215 589 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 POU4F3Q15319 338 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 TRMT5Q32P41 509 aaKnown RBP13.56□□□□□ -0.24
SSH1-204ENST00000546697 SWT1Q5T5J6 900 aaKnown RBP13.56□□□□□ -0.24
SSH1-204ENST00000546697 ADAM5Q6NVV9 412 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 P2RY8Q86VZ1 359 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 CXorf67Q86X51 503 aaPredicted RBP13.56□□□□□ -0.24
SSH1-204ENST00000546697 CALHM3Q86XJ0 350 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 OR8J3Q8NGG0 315 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 OR6S1Q8NH40 331 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 MFSD8Q8NHS3 518 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 HSD17B8Q92506 261 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 ZNF607Q96SK3 696 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
SSH1-204ENST00000546697 PTDSS2Q9BVG9 487 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 KLHL4Q9C0H6 718 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 TESQ9UGI8 421 aaKnown RBP13.56□□□□□ -0.24
SSH1-204ENST00000546697 FLVCR1Q9Y5Y0 555 aa13.56□□□□□ -0.24
SSH1-204ENST00000546697 TPST1O60507 370 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 TMCC2O75069 709 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 SERPINB7O75635 380 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 VAMP5O95183 116 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 FPR1P21462 350 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 DNASE1P24855 282 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 HTR2AP28223 471 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 MDH1P40925 334 aaKnown RBP13.55□□□□□ -0.24
SSH1-204ENST00000546697 ARFIP2P53365 341 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 GUCY1A3Q02108 690 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 KLF10Q13118 480 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 SELPLGQ14242 412 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 EXOC3L2Q2M3D2 409 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 HSP90B2PQ58FF3 399 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 FBXW9Q5XUX1 488 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 CCDC103Q8IW40 242 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 ZIC4Q8N9L1 334 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 DNAJA4Q8WW22 397 aaPredicted RBP13.55□□□□□ -0.24
SSH1-204ENST00000546697 SLC38A4Q969I6 547 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 TRIM2Q9C040 744 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 CCM2LQ9NUG4 571 aaPredicted RBP13.55□□□□□ -0.24
SSH1-204ENST00000546697 C6orf203Q9P0P8 240 aaPredicted RBP13.55□□□□□ -0.24
SSH1-204ENST00000546697 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.55□□□□□ -0.24
SSH1-204ENST00000546697 ANGPT4Q9Y264 503 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 SLC9A8Q9Y2E8 581 aa13.55□□□□□ -0.24
SSH1-204ENST00000546697 LOC102725191A0A1B0GVB3 256 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.54□□□□□ -0.24
SSH1-204ENST00000546697 TPST2O60704 377 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 LGI1O95970 557 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 ADAP00813 363 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 PAX1P15863 534 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 PCGF2P35227 344 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 ART1P52961 327 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 DMTNQ08495 405 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 NRF1Q16656 503 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 TIMM23BQ5SRD1 257 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 NANOGP8Q6NSW7 305 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 ZNF433Q8N7K0 673 aaPredicted RBP13.54□□□□□ -0.24
SSH1-204ENST00000546697 C10orf82Q8WW14 230 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 KISS1RQ969F8 398 aaPredicted RBP13.54□□□□□ -0.24
SSH1-204ENST00000546697 S100PBPQ96BU1 408 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 SH3GL1Q99961 368 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 NANOGQ9H9S0 305 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
SSH1-204ENST00000546697 PARPBPQ9NWS1 579 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 PRSS50Q9UI38 385 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 NOSIPQ9Y314 301 aaKnown RBP13.54□□□□□ -0.24
SSH1-204ENST00000546697 PRR14LQ5THK1 2151 aa13.54□□□□□ -0.24
SSH1-204ENST00000546697 IGKV1D-42A0A075B6H8 117 aa13.53□□□□□ -0.24
SSH1-204ENST00000546697 A0A0B4J2E0 115 aa13.53□□□□□ -0.24
SSH1-204ENST00000546697 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms