RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SLC35B4Q969S0 331 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 TMEM19Q96HH6 336 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 OR52B2Q96RD2 323 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 SMR3AQ99954 134 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 GRIP2Q9C0E4 1043 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 BARX1Q9HBU1 254 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 TCF7L2Q9NQB0 619 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 RLIMQ9NVW2 624 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 CISD1Q9NZ45 108 aaKnown RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 MAGED1Q9Y5V3 778 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 FLVCR1Q9Y5Y0 555 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 ACANP16112 2415 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 CSMD1Q96PZ7 3565 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 DSPPQ9NZW4 1301 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 ITPR3Q14573 2671 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 TRIM64A6NGJ6 449 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 TRIM64BA6NI03 449 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 OR6C65A6NJZ3 312 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 LIPT2A6NK58 231 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 CLIC1O00299 241 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 ABCD4O14678 606 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 VAMP5O95183 116 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 SOD3P08294 240 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 GKN3PP0CG01 181 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 IMPDH2P12268 514 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 PPIBP23284 216 aaKnown RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 EDNRAP25101 427 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 ACAA2P42765 397 aaKnown RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 CDH11P55287 796 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 CEACAM7Q14002 265 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 SLC17A1Q14916 467 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 RGNQ15493 299 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 OR7A5Q15622 319 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 MAPK11Q15759 364 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 GTDC1Q4AE62 458 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 ZNF311Q5JNZ3 666 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 OTUD3Q5T2D3 398 aaPredicted RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 AGAP6Q5VW22 663 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 TMEM225Q6GV28 225 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 SEZ6L2Q6UXD5 910 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 AAED1Q7RTV5 226 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 MAVSQ7Z434 540 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 C17orf78Q8N4C9 275 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 GOLGA6L1Q8N7Z2 621 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 POMGNT2Q8NAT1 580 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 C1orf162Q8NEQ5 155 aaPredicted RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 KBTBD8Q8NFY9 601 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 OR9I1Q8NGQ6 314 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 BBS10Q8TAM1 723 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 GTF2H4Q92759 462 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 VPS33AQ96AX1 596 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 TMEM45BQ96B21 275 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 DNAJA3Q96EY1 480 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 AURKBQ96GD4 344 aaPredicted RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 MUS81Q96NY9 551 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 CCDC28BQ9BUN5 200 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 TRIM2Q9C040 744 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 BCL2L10Q9HD36 194 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 SLC6A13Q9NSD5 602 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 TMEM45AQ9NWC5 275 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 DCTN4Q9UJW0 460 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 POU2F3Q9UKI9 436 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 ZNF443Q9Y2A4 671 aaPredicted RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 AMDHD2Q9Y303 409 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 PCDHB14Q9Y5E9 798 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 SLC25A15Q9Y619 301 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 ARID1AO14497 2285 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 PCNX3Q9H6A9 2034 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 ROS1P08922 2347 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 DCHS2Q6V1P9 2916 aa8.25□□□□□ -1.09
YBX3-218ENST00000546298 NUP214P35658 2090 aaPredicted RBP8.25□□□□□ -1.09
YBX3-218ENST00000546298 ZC3H12DA2A288 527 aaKnown RBP8.24□□□□□ -1.09
YBX3-218ENST00000546298 AQP7P3A6NL99 342 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 SHISA9B4DS77 424 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 RAMP1O60894 148 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 KRT33AO76009 404 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 AKR7A3O95154 331 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 AHSA1O95433 338 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 WNT11O96014 354 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 BMP2P12643 396 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 ETS2P15036 469 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 PAX7P23759 505 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 CD40P25942 277 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 MPGP29372 298 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 ZNF83P51522 516 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 PRPS1P60891 318 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 PPP2R2BQ00005 443 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 VEZF1Q14119 521 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 GABRA6Q16445 453 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 NRF1Q16656 503 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 CLEC12BQ2HXU8 276 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 PGGHGQ32M88 737 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 RPS26P11Q5JNZ5 115 aaPredicted RBP8.24□□□□□ -1.09
YBX3-218ENST00000546298 C1orf140Q5VVS0 124 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 SLC22A25Q6T423 547 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 KLHL24Q6TFL4 600 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 DTX2Q86UW9 622 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 KRT73Q86Y46 540 aa8.24□□□□□ -1.09
YBX3-218ENST00000546298 CIARTQ8N365 385 aaPredicted RBP8.24□□□□□ -1.09
YBX3-218ENST00000546298 CLIP4Q8N3C7 705 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms