RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CSF3P09919 207 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 FKBP2P26885 142 aaKnown RBP10.95□□□□□ -0.66
COPS7A-221ENST00000546229 MPGP29372 298 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 IL12AP29459 219 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 CDKN2CP42773 168 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 MAGEA8P43361 318 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 MVDP53602 400 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 OR2B6P58173 313 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
COPS7A-221ENST00000546229 LGALS3BPQ08380 585 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 EPS8Q12929 822 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 RAB35Q15286 201 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 PDCD2Q16342 344 aaPredicted RBP10.95□□□□□ -0.66
COPS7A-221ENST00000546229 SYPL1Q16563 259 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 HIKESHIQ53FT3 197 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 CMIPQ8IY22 773 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 ARFGAP2Q8N6H7 521 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 ZNF563Q8TA94 476 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 MSI2Q96DH6 328 aaKnown RBP10.95□□□□□ -0.66
COPS7A-221ENST00000546229 ZHX1-C8orf76Q96EF9 292 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 TRNT1Q96Q11 434 aaKnown RBP10.95□□□□□ -0.66
COPS7A-221ENST00000546229 SOX7Q9BT81 388 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 CRNNQ9UBG3 495 aaPredicted RBP10.95□□□□□ -0.66
COPS7A-221ENST00000546229 LPAR3Q9UBY5 353 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 POU2F3Q9UKI9 436 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 CHST2Q9Y4C5 530 aa10.95□□□□□ -0.66
COPS7A-221ENST00000546229 TLDC2A0PJX2 215 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 AQP7P3A6NL99 342 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 EIF1BO60739 113 aaKnown RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 NPIPB7O75200 414 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 IGLV1-44P01699 117 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 USF1P22415 310 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 TACR3P29371 465 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 APOBEC3AP31941 199 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 ACAA2P42765 397 aaKnown RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 SLC1A3P43003 542 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 NR4A2P43354 598 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 HTR3AP46098 478 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 POLR2HP52434 150 aaKnown RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 VSNL1P62760 191 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 SLC35A1P78382 337 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 COX20Q5RI15 118 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 MRPL2Q5T653 305 aaKnown RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 CYB5R2Q6BCY4 276 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 OGFOD2Q6N063 350 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 MYPOPQ86VE0 399 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 RNF130Q86XS8 419 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 LRRC34Q8IZ02 419 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 OR9K2Q8NGE7 335 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 AENQ8WTP8 325 aaKnown RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 PPP1R36Q96LQ0 422 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 KCNK17Q96T54 332 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 SLC35A5Q9BS91 424 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 SEC61A2Q9H9S3 476 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 SLC6A13Q9NSD5 602 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 MARCOQ9UEW3 520 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-221ENST00000546229 BTNL2Q9UIR0 455 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 MOKQ9UQ07 419 aa10.94□□□□□ -0.66
COPS7A-221ENST00000546229 TMEM229AB2RXF0 380 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 E9PBE3 544 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 FRS3O43559 492 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 LMX1BO60663 402 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 SERPINE1P05121 402 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 CCNA2P20248 432 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 MAP2K6P52564 334 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 LSM11P83369 360 aaKnown RBP eCLIP10.93□□□□□ -0.66
COPS7A-221ENST00000546229 ADIPOQQ15848 244 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 ZSWIM7Q19AV6 140 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 DPY19L1Q2PZI1 675 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 FAM174BQ3ZCQ3 159 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 ATAD3BQ5T9A4 648 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 ANXA8L1Q5VT79 327 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 LRRC74BQ6ZQY2 392 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 IL17RELQ6ZVW7 336 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 TMEM109Q9BVC6 243 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 C19orf24Q9BVV8 132 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 SF3B5Q9BWJ5 86 aaKnown RBP10.93□□□□□ -0.66
COPS7A-221ENST00000546229 RSPO3Q9BXY4 272 aaPredicted RBP10.93□□□□□ -0.66
COPS7A-221ENST00000546229 DPY30Q9C005 99 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 PIF1Q9H611 641 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 FKRPQ9H9S5 495 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 ATP23Q9Y6H3 246 aa10.93□□□□□ -0.66
COPS7A-221ENST00000546229 ARPC4-TTLL3A0A0A6YYG9 625 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 CDHR4A6H8M9 788 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 ZNF503-AS2A6NEH8 195 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 FTCDNL1E5RQL4 147 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 NDUFS8O00217 210 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 AKR7A3O95154 331 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 CPSF4O95639 269 aaKnown RBP10.92□□□□□ -0.66
COPS7A-221ENST00000546229 CALCRP30988 508 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 GZMKP49863 264 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 ABCE1P61221 599 aaKnown RBP10.92□□□□□ -0.66
COPS7A-221ENST00000546229 MPP2Q14168 576 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 EFNB3Q15768 340 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 TBRG1Q3YBR2 411 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 GPAT3Q53EU6 434 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 TNFAIP8L3Q5GJ75 292 aa10.92□□□□□ -0.66
COPS7A-221ENST00000546229 FAM120AOSQ5T036 256 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms