RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 AVL9Q8NBF6 648 aa13.83□□□□□ -0.2
USP28-214ENST00000545540 CREB3L1Q96BA8 519 aa13.83□□□□□ -0.2
USP28-214ENST00000545540 AHCYL2Q96HN2 611 aaKnown RBP13.83□□□□□ -0.2
USP28-214ENST00000545540 ELF4Q99607 663 aaPredicted RBP13.83□□□□□ -0.2
USP28-214ENST00000545540 GON7Q9BXV9 100 aa13.83□□□□□ -0.2
USP28-214ENST00000545540 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
USP28-214ENST00000545540 OR6C68A6NDL8 312 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 MEIS3P1A6NDR6 274 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 TGFBR3LH3BV60 316 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 CYR61O00622 381 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 DHFRP00374 187 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 EPXP11678 715 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 MAOAP21397 527 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 FCRLAQ7L513 359 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 CMTM4Q8IZR5 234 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 ULBP3Q9BZM4 244 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 ZFP64Q9NPA5 681 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 SMAD9O15198 467 aaKnown RBP13.82□□□□□ -0.2
USP28-214ENST00000545540 NOS1APO75052 506 aaPredicted RBP13.82□□□□□ -0.2
USP28-214ENST00000545540 PTP4A3O75365 173 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 FBXO45P0C2W1 286 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 STOMP27105 288 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 ACSM1Q08AH1 577 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 UBE2Q1Q7Z7E8 422 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 CDRT4Q8N9R6 151 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 MOSPD2Q8NHP6 518 aa13.82□□□□□ -0.2
USP28-214ENST00000545540 EPOPA6NHQ4 379 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 FLRT2O43155 660 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 BRINP1O60477 761 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 TMIGD3P0DMS9 266 aaPredicted RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 SELENOPP49908 381 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 MGAT2Q10469 447 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 FHL1Q13642 323 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 ALG11Q2TAA5 492 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 RCBTB1Q8NDN9 531 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 CEP76Q8TAP6 659 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 DPAGT1Q9H3H5 408 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 KCNK15Q9H427 330 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 ST6GALNAC2Q9UJ37 374 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 PPIEQ9UNP9 301 aaKnown RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 TRABD2BA6NFA1 517 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 PRR19A6NJB7 356 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 ICMTO60725 284 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 ST6GAL1P15907 406 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 NTSR1P30989 418 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 ACAA2P42765 397 aaKnown RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 NANOS3P60323 173 aaKnown RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 UBE2MP61081 183 aaKnown RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 TNK1Q13470 666 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 DMKNQ6E0U4 476 aaPredicted RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 RTL4Q6ZR62 310 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 ABHD13Q7L211 337 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 OR2T4Q8NH00 348 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 FAM174AQ8TBP5 190 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 MAP6Q96JE9 813 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 Q96M85 177 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 SEC22CQ9BRL7 303 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 GHITMQ9H3K2 345 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 OR8G3PP0DMU2 310 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 VEGFCP49767 419 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 SIRPAP78324 504 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 Q6ZTK2 550 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 PLCZ1Q86YW0 608 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 CAMKVQ8NCB2 501 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 ANKRD9Q96BM1 317 aaPredicted RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 ZNF524Q96C55 264 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 METTL17Q9H7H0 456 aaPredicted RBP13.81□□□□□ -0.2
USP28-214ENST00000545540 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
USP28-214ENST00000545540 A0A0B4J2E0 115 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 A0A1B0GX12 115 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 CDC14CA4D256 554 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 PIN1P1O15428 100 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 CFDP00746 253 aaPredicted RBP13.8□□□□□ -0.2
USP28-214ENST00000545540 ZNF250P15622 560 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 SLC2A5P22732 501 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 GDNFP39905 211 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 RPS11P62280 158 aaKnown RBP eCLIP13.8□□□□□ -0.2
USP28-214ENST00000545540 DLX2Q07687 328 aaPredicted RBP13.8□□□□□ -0.2
USP28-214ENST00000545540 Q6ZSR6 202 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 TMPRSS11FQ6ZWK6 438 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 PRR22Q8IZ63 422 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 OR52I2Q8NH67 350 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 ACOT12Q8WYK0 555 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 TM4SF19Q96DZ7 209 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 SMIM10L1P0DMW3 83 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 RBMS1P29558 406 aaKnown RBP13.8□□□□□ -0.2
USP28-214ENST00000545540 AQP2P41181 271 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 STX4Q12846 297 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 TMEM44Q2T9K0 475 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 SLC35F2Q8IXU6 374 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 OR13H1Q8NG92 308 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 C17orf50Q8WW18 174 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 RBM18Q96H35 190 aaKnown RBP13.8□□□□□ -0.2
USP28-214ENST00000545540 SMIM10Q96HG1 83 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 WDR92Q96MX6 357 aa13.8□□□□□ -0.2
USP28-214ENST00000545540 RPS6KB2Q9UBS0 482 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms