RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 FBXO9Q9UK97 447 aaPredicted RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 STK38LQ9Y2H1 464 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 SPIN1Q9Y657 262 aaPredicted RBP8.09□□□□□ -1.11
CHD4-212ENST00000545083 RYR3Q15413 4870 aa8.09□□□□□ -1.11
CHD4-212ENST00000545083 A0A096LPE4 126 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 TRAV20A0A0B4J274 112 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 IGHV2OR16-5A0A0B4J2B6 119 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 A0A1W2PPZ6 126 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 ZSCAN12O43309 604 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 UGT2B17O75795 530 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 URI1O94763 535 aaPredicted RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 IGKV3-15P01624 115 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 TCN1P20061 433 aaPredicted RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 PRPH2P23942 346 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 RYKP34925 604 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 PHBP35232 272 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 CCT3P49368 545 aaKnown RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 SERPINB9P50453 376 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 GNG11P61952 73 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 RPS26P62854 115 aaKnown RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 GPR68Q15743 365 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 MAPK14Q16539 360 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 C3orf36Q3SXR2 165 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 CCNYL1Q8N7R7 359 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 POMGNT2Q8NAT1 580 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 FAM71CQ8NEG0 241 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 OR9K2Q8NGE7 335 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 TAF15Q92804 592 aaKnown RBP eCLIP8.08□□□□□ -1.12
CHD4-212ENST00000545083 ALKBH3Q96Q83 286 aaPredicted RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 OR7D2Q96RA2 312 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 NAPGQ99747 312 aaPredicted RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 CCT7Q99832 543 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 FUT8Q9BYC5 575 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 NMUR2Q9GZQ4 415 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 SERHL2Q9H4I8 314 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 ZNF275Q9NSD4 429 aaPredicted RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 ZDHHC18Q9NUE0 388 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 TMEM181Q9P2C4 612 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
CHD4-212ENST00000545083 UTP11Q9Y3A2 253 aaKnown RBP8.08□□□□□ -1.12
CHD4-212ENST00000545083 NUP214P35658 2090 aaPredicted RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 TMEM72A0PK05 275 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 ZC3H12DA2A288 527 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 ZNF503-AS2A6NEH8 195 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 OR6C65A6NJZ3 312 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 POC1B-GALNT4F8VUJ3 575 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 UPK3AO75631 287 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 BCL10O95999 233 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 FSHBP01225 129 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 PGM1P36871 562 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 CLK1P49759 484 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 SELENOPP49908 381 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 UBE2NP61088 152 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 RPL38P63173 70 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 SNTB2Q13425 540 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 RFTN2Q52LD8 501 aaPredicted RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 CLEC6AQ6EIG7 209 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 KRT80Q6KB66 452 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 EIF3MQ7L2H7 374 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 AAED1Q7RTV5 226 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 GRINAQ7Z429 371 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 SLC22A9Q8IVM8 553 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 BPIFB2Q8N4F0 458 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 TMEM99Q8N816 258 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 OR7A2PQ8NGA2 310 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 OR56A1Q8NGH5 318 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 ZNF563Q8TA94 476 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 DVL3Q92997 716 aaPredicted RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 LRRC58Q96CX6 371 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 METTL2AQ96IZ6 378 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 C1orf147Q96MC9 270 aaPredicted RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 ANKRD27Q96NW4 1050 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 DUX5Q96PT3 197 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 MRPL37Q9BZE1 423 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 DDX28Q9NUL7 540 aaKnown RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 C1orf109Q9NX04 203 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 MKLN1Q9UL63 735 aa8.07□□□□□ -1.12
CHD4-212ENST00000545083 FAF1Q9UNN5 650 aaPredicted RBP8.07□□□□□ -1.12
CHD4-212ENST00000545083 TMED7-TICAM2A0A0A6YYA0 188 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 CLDN24A6NM45 220 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ZNF587BE7ETH6 402 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ANKRD28O15084 1053 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 PPIHO43447 177 aaKnown RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 PLPP2O43688 288 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 SYNGR3O43761 229 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 EIF1BO60739 113 aaKnown RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 CRCPO75575 148 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 RP2O75695 350 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 NCR1O76036 304 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 PRSS23O95084 383 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 C6orf47O95873 294 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 NUDT17P0C025 328 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 LAMP1P11279 417 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 CBR1P16152 277 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ACHEP22303 614 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ALDH3B1P43353 468 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 SEC24CP53992 1094 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 SLC35A1P78382 337 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 MYBPC1Q00872 1141 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms