RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C3orf49Q96BT1 292 aa13.96□□□□□ -0.17
CCDC78-216ENST00000544996 ACTR6Q9GZN1 396 aa13.96□□□□□ -0.17
CCDC78-216ENST00000544996 C12orf10Q9HB07 376 aa13.96□□□□□ -0.17
CCDC78-216ENST00000544996 NOSIPQ9Y314 301 aaKnown RBP13.96□□□□□ -0.17
CCDC78-216ENST00000544996 LRBAP50851 2863 aa13.96□□□□□ -0.18
CCDC78-216ENST00000544996 LIPT2A6NK58 231 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 M0QX08 132 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 GCM2O75603 506 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 AHSA1O95433 338 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 CNOT4O95628 575 aaKnown RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 ADAP00813 363 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 PNMTP11086 282 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 CRYGSP22914 178 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 IL32P24001 234 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 DNAJA1P31689 397 aaKnown RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 PCGF2P35227 344 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 SLC16A1P53985 500 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 PCBP3P57721 371 aaKnown RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 DMTNQ08495 405 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 VMACQ2NL98 169 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 GLIPR1L2Q4G1C9 344 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 SFRP5Q5T4F7 317 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 C1orf140Q5VVS0 124 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 ULK3Q6PHR2 472 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 RANBP3LQ86VV4 465 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 SMYD1Q8NB12 490 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 STK35Q8TDR2 534 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 SLC26A7Q8TE54 656 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 NRGNQ92686 78 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 APH1AQ96BI3 265 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 USB1Q9BQ65 265 aaKnown RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 TMEM27Q9HBJ8 222 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 PARPBPQ9NWS1 579 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 C6orf203Q9P0P8 240 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 ARMCX1Q9P291 453 aa13.95□□□□□ -0.18
CCDC78-216ENST00000544996 TESQ9UGI8 421 aaKnown RBP13.95□□□□□ -0.18
CCDC78-216ENST00000544996 CREBBPQ92793 2442 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 A0A1B0GWA3 101 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 ZNF814B7Z6K7 855 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 FXYD1O00168 92 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 MRPL33O75394 65 aaKnown RBP13.94□□□□□ -0.18
CCDC78-216ENST00000544996 C8BP07358 591 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 ITGADQ13349 1161 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 RABL3Q5HYI8 236 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 ALG10BQ5I7T1 473 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-216ENST00000544996 FAM91A1Q658Y4 838 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 C6orf89Q6UWU4 347 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 SPATA21Q7Z572 469 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 COMTD1Q86VU5 262 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 UBE2J2Q8N2K1 259 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 RP9Q8TA86 221 aaKnown RBP13.94□□□□□ -0.18
CCDC78-216ENST00000544996 RASSF5Q8WWW0 418 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 NINJ1Q92982 152 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 KISS1RQ969F8 398 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-216ENST00000544996 PIK3IP1Q96FE7 263 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 SLC47A1Q96FL8 570 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 RSPO3Q9BXY4 272 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-216ENST00000544996 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
CCDC78-216ENST00000544996 PIF1Q9H611 641 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 ADPRHL2Q9NX46 363 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 PRSS50Q9UI38 385 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 ST6GALNAC2Q9UJ37 374 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 SLC9A8Q9Y2E8 581 aa13.94□□□□□ -0.18
CCDC78-216ENST00000544996 DEFB108AA8MXU0 73 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 TMEM229AB2RXF0 380 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 RAMP1O60894 148 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 NPIPB7O75200 414 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 AKR7A3O95154 331 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 LGI1O95970 557 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 OPN1SWP03999 348 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 DNASE1P24855 282 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 HTR2AP28223 471 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 GTF2E2P29084 291 aaKnown RBP13.93□□□□□ -0.18
CCDC78-216ENST00000544996 GZMMP51124 257 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 DUSP7Q16829 419 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 FBXW9Q5XUX1 488 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 TMEM225Q6GV28 225 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 ERICH5Q6P6B1 374 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 C5orf46Q6UWT4 87 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 TMEM99Q8N816 258 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 MFSD8Q8NHS3 518 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 RNF217Q8TC41 542 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 S100PBPQ96BU1 408 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 ELAC2Q9BQ52 826 aaKnown RBP13.93□□□□□ -0.18
CCDC78-216ENST00000544996 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
CCDC78-216ENST00000544996 FAM107BQ9H098 131 aa13.93□□□□□ -0.18
CCDC78-216ENST00000544996 AQP7P3A6NL99 342 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 OR2T1O43869 369 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 FMO6PO60774 539 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 VAMP5O95183 116 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 THBDP07204 575 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 SEC24CP53992 1094 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 SLC17A1Q14916 467 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 OR1Q1Q15612 314 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 BEX5Q5H9J7 111 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 CASP12Q6UXS9 341 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 C22orf34Q6ZV56 151 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 BHLHA15Q7RTS1 189 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-216ENST00000544996 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms