RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ADAMTS15Q8TE58 950 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 HPS1Q92902 700 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 CHMP6Q96FZ7 201 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SERINC1Q9NRX5 453 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SLC7A10Q9NS82 523 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 NKIRAS1Q9NYS0 192 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 NOP53Q9NZM5 478 aaKnown RBP11.17□□□□□ -0.62
USP28-212ENST00000544750 FLVCR1Q9Y5Y0 555 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 A0A0A6YYJ9 748 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 B9A039 149 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 SLCO1B7G3V0H7 640 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 KLF11O14901 512 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 ANKRD28O15084 1053 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 PDE5AO76074 875 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 APOBEC1P41238 236 aaKnown RBP11.16□□□□□ -0.62
USP28-212ENST00000544750 PPOXP50336 477 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 CDH15P55291 814 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 MAD2L1Q13257 205 aaPredicted RBP11.16□□□□□ -0.62
USP28-212ENST00000544750 EFNB3Q15768 340 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 CARTPTQ16568 116 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 TSPO2Q5TGU0 170 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 C9orf135Q5VTT2 229 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 BHLHB9Q6PI77 547 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 MAVSQ7Z434 540 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 R3HCC1LQ7Z5L2 792 aaKnown RBP11.16□□□□□ -0.62
USP28-212ENST00000544750 KIRREL3Q8IZU9 778 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 OR56A1Q8NGH5 318 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 TMEM234Q8WY98 164 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 COQ8BQ96D53 544 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 OR7D2Q96RA2 312 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 VRK1Q99986 396 aaPredicted RBP11.16□□□□□ -0.62
USP28-212ENST00000544750 PLK3Q9H4B4 646 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 SERHL2Q9H4I8 314 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 CTPS2Q9NRF8 586 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 ARGLU1Q9NWB6 273 aaPredicted RBP11.16□□□□□ -0.62
USP28-212ENST00000544750 HDGFL3Q9Y3E1 203 aa11.16□□□□□ -0.62
USP28-212ENST00000544750 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 FCMRO60667 390 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 BCAS1O75363 584 aaPredicted RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 UGT2B17O75795 530 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 KRT16P08779 473 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 ALDOCP09972 364 aaKnown RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 PGCP20142 388 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 MPGP29372 298 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 SERPINF1P36955 418 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 SRP14P37108 136 aaKnown RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 CLK1P49759 484 aaKnown RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 IDH3GP51553 393 aaPredicted RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 CHN2P52757 468 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 CLDN8P56748 225 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 PRPS1P60891 318 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 TP53BP2Q13625 1128 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 ADIPOQQ15848 244 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 ATG16L1Q676U5 607 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 OGFOD2Q6N063 350 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 SLC46A3Q7Z3Q1 461 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 LSRQ86X29 649 aaPredicted RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 ADGRG3Q86Y34 549 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 LRRC34Q8IZ02 419 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 OR5D16Q8NGK9 328 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 SGMS2Q8NHU3 365 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 SFXN5Q8TD22 340 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 ZMYND19Q96E35 227 aaPredicted RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 ZHX1-C8orf76Q96EF9 292 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 DNAJA3Q96EY1 480 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 OR11A1Q9GZK7 315 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 CA10Q9NS85 328 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 CHRNA9Q9UGM1 479 aa11.15□□□□□ -0.62
USP28-212ENST00000544750 FAF1Q9UNN5 650 aaPredicted RBP11.15□□□□□ -0.62
USP28-212ENST00000544750 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 HDAC3O15379 428 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 WNT11O96014 354 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 CSTAP01040 98 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 IGFBP1P08833 259 aaPredicted RBP11.14□□□□□ -0.63
USP28-212ENST00000544750 TFPIP10646 304 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 KITP10721 976 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 LBPP18428 481 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 PRPS1L1P21108 318 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 PGM1P36871 562 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 RPL3P39023 403 aaKnown RBP11.14□□□□□ -0.63
USP28-212ENST00000544750 MAGEA8P43361 318 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 DVL1P1P54792 670 aaPredicted RBP11.14□□□□□ -0.63
USP28-212ENST00000544750 TGFBR3Q03167 851 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 PLAURQ03405 335 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 RIN1Q13671 783 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 SLC17A1Q14916 467 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 MAPK14Q16539 360 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 CASP12Q6UXS9 341 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 OLIG3Q7RTU3 272 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 ZIC4Q8N9L1 334 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 TMEM45BQ96B21 275 aa11.14□□□□□ -0.63
USP28-212ENST00000544750 MAELQ96JY0 434 aaKnown RBP11.14□□□□□ -0.63
USP28-212ENST00000544750 WDR55Q9H6Y2 383 aaPredicted RBP11.14□□□□□ -0.63
USP28-212ENST00000544750 PARPBPQ9NWS1 579 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms