RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 HS3ST1O14792 307 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 EIF1BO60739 113 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SMPD2O60906 423 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 IGHV3-9P01782 118 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ARAFP10398 606 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 UQCRBP14927 111 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ADSLP30566 484 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 STX1BP61266 288 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 BNIP2Q12982 314 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 LARS2Q15031 903 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PAQR6Q6TCH4 344 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PRSS57Q6UWY2 283 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF100Q8IYN0 542 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GOLGA6L1Q8N7Z2 621 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 AKAP1Q92667 903 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SLC35B4Q969S0 331 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 C3orf49Q96BT1 292 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZHX1-C8orf76Q96EF9 292 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 MAGEB18Q96M61 343 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GSX2Q9BZM3 304 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 RAD21L1Q9H4I0 556 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF701Q9NV72 531 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 INTS9Q9NV88 658 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 MALT1Q9UDY8 824 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF232Q9UNY5 417 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 IFT52Q9Y366 437 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FLVCR1Q9Y5Y0 555 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ALPK2Q86TB3 2170 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 A0A1W2PP18 115 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMEM229AB2RXF0 380 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NR5A2O00482 541 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FRS3O43559 492 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DANCRP0C864 163 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ETS2P15036 469 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GPX2P18283 190 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CXCR1P25024 350 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 IRX1P78414 480 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 HOXC5Q00444 222 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 BSPH1Q075Z2 132 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CEACAM7Q14002 265 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SQLEQ14534 574 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 AGKQ53H12 422 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF311Q5JNZ3 666 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 Q5PR19 223 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TIMM23BQ5SRD1 257 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ALKBH2Q6NS38 261 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 P2RY8Q86VZ1 359 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CADM2Q8N3J6 435 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMEM99Q8N816 258 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 BBS10Q8TAM1 723 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DYDC1Q8WWB3 177 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NEUROG1Q92886 237 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 APH1AQ96BI3 265 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 MUS81Q96NY9 551 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 RNF115Q9Y4L5 304 aa11.55□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OR5H1A6NKK0 313 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 AQP7P3A6NL99 342 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 A8MVM7 634 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FTCDNL1E5RQL4 147 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OVOL3O00110 214 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ARHGEF9O43307 516 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TPST1O60507 370 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FZD7O75084 574 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 MRPL33O75394 65 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 AKR7A3O95154 331 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SOD3P08294 240 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ITGA5P08648 1049 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GGT1P19440 569 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 IDUAP35475 653 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PTH2RP49190 550 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 EGR4Q05215 589 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PPA1Q15181 289 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GABRA6Q16445 453 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 RUNDC3AQ59EK9 446 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CIARTQ8N365 385 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DPP10Q8N608 796 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NFKBIDQ8NI38 313 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMEM45BQ96B21 275 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 THOC1Q96FV9 657 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 C18orf12Q96KH6 178 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SMR3AQ99954 134 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 WFDC6Q9BQY6 131 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NAA11Q9BSU3 229 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PTDSS2Q9BVG9 487 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TRIM2Q9C040 744 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMEM38AQ9H6F2 299 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ESRP2Q9H6T0 727 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NGBQ9NPG2 151 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SLC25A15Q9Y619 301 aa11.54□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 EDF1O60869 148 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMCC2O75069 709 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GPIP06744 558 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CD3EP07766 207 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms