RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 RPL36Q9Y3U8 105 aaKnown RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 WNT9AO14904 365 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 SLC28A2O43868 658 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 CRTAPO75718 401 aaPredicted RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 SRPRAP08240 638 aaKnown RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 ABOP16442 354 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 SRSF3P84103 164 aaKnown RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 SCGB2B2Q4G0G5 96 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 TMEM31Q5JXX7 168 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 HENMT1Q5T8I9 393 aaKnown RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 QSOX2Q6ZRP7 698 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 IZUMO1Q8IYV9 350 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 MMP21Q8N119 569 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 OR52B4Q8NGK2 314 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 KLK6Q92876 244 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 RSPRY1Q96DX4 576 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 KANTRA0A1W2PQU2 76 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 FAM227AF5H4B4 570 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 LATO43561 262 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 GALR3O60755 368 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 AQP8O94778 261 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 FGF19O95750 216 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 UBBP0CG47 229 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CPEP16870 476 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 IL1RNP18510 177 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 UQCRC2P22695 453 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SHC1P29353 583 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SOAT1P35610 550 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SOX18P35713 384 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 MAP3K8P41279 467 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 MRPL19P49406 292 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 NDUFA6P56556 154 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CARD18P57730 90 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 PKIAP61925 76 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 TBPL1P62380 186 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 RPS27AP62979 156 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 UBA52P62987 128 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 NHLH2Q02577 135 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 VMACQ2NL98 169 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 OR2W3Q7Z3T1 314 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 LRRC28Q86X40 367 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 MAFIPQ8WZ33 124 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 OCSTAMPQ9BR26 566 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 PBX4Q9BYU1 374 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 GAR1Q9NY12 217 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 INSL6Q9Y581 213 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 A0A0G2JN53 185 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SHISA3A0PJX4 238 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ANKRD61A6NGH8 418 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 GOSR2O14653 212 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 IGFBP1P08833 259 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 SAGP10523 405 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 EPXP11678 715 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ADH5P11766 374 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 EN2P19622 333 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 ATP6V1E1P36543 226 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 DCDP81605 110 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 MRPS10P82664 201 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 MAT1AQ00266 395 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 SLBPQ14493 270 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH4-201ENST00000543233 FAM189A2Q15884 450 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ZNF77Q15935 545 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CRB2Q5IJ48 1285 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CPTPQ5TA50 214 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 UQCC3Q6UW78 93 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 PRSS45Q7RTY3 260 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ZNF227Q86WZ6 799 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 OR5M3Q8NGP4 307 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ZNF480Q8WV37 535 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CCDC74BQ96LY2 380 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ALG8Q9BVK2 526 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 BCO1Q9HAY6 547 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 PTGFRNQ9P2B2 879 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 J3KTA2 159 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 FADS1O60427 444 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SOD1P00441 154 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SERPIND1P05546 499 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 LINC00271P0C7V0 271 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 PRPS1L1P21108 318 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CERS1P27544 350 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CRISP1P54107 249 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 F2RL1P55085 397 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 WNT4P56705 351 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SLC36A2Q495M3 483 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 ZC3H14Q6PJT7 736 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 RNF165Q6ZSG1 346 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ESPNLQ6ZVH7 1005 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 SZRD1Q7Z422 152 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 TRAM1L1Q8N609 369 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 CELF5Q8N6W0 485 aaKnown RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 SPPL3Q8TCT6 385 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 ASB16Q96NS5 453 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 GPN1Q9HCN4 374 aaPredicted RBP10.44□□□□□ -0.74
CDH4-201ENST00000543233 TM7SF3Q9NS93 570 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 TVP23BQ9NYZ1 205 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 C5AR2Q9P296 337 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 RCE1Q9Y256 329 aa10.44□□□□□ -0.74
CDH4-201ENST00000543233 PPIL1Q9Y3C6 166 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms