RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PROS1P07225 676 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 FBP1P09467 338 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 HIST1H2AGP0C0S8 130 aaPredicted RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 ZDHHC11BP0C7U3 371 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CALCBP10092 127 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 THRBP10828 461 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PRPS1L1P21108 318 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PRKACGP22612 351 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ACKR3P25106 362 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 OR1D2P34982 312 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 UGT1A3P35503 534 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ATP5C1P36542 298 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 FDFT1P37268 417 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ACTR1BP42025 376 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ALDH3B2P48448 385 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 SLC1A6P48664 564 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 GNG10P50151 68 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 NDST1P52848 882 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PKNOX1P55347 436 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PRPS1P60891 318 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CYCSP99999 105 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 CNTN2Q02246 1040 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 HSF2Q03933 536 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CYP24A1Q07973 514 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 STX4Q12846 297 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 OVGP1Q12889 678 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 NME3Q13232 169 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 GPM6BQ13491 265 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MEF2DQ14814 521 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TMEM132DQ14C87 1099 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 HEPACAMQ14CZ8 416 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ANGPT1Q15389 498 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 USF2Q15853 346 aaPredicted RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 CHRFAM7AQ494W8 412 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 NKAIN1Q4KMZ8 207 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 GPAT3Q53EU6 434 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MPPE1Q53F39 396 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TMEM41BQ5BJD5 291 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CDKL4Q5MAI5 379 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 SPATA46Q5T0L3 261 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ATF7IP2Q5U623 682 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MLIPQ5VWP3 458 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 LYPLAL1Q5VWZ2 237 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PLPP4Q5VZY2 271 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 LRRC66Q68CR7 880 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 NANOGP8Q6NSW7 305 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 NPSR1Q6W5P4 371 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TMEM64Q6YI46 380 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 C17orf107Q6ZR85 190 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TMEM26Q6ZUK4 368 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ARMCX2Q7L311 632 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CHMP1BQ7LBR1 199 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 SSX9Q7RTT3 188 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 EFL1Q7Z2Z2 1120 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 SMIM15Q7Z3B0 74 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 LRRTM1Q86UE6 522 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 C17orf64Q86WR6 236 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PLCZ1Q86YW0 608 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 UNC5CLQ8IV45 518 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MISPQ8IVT2 679 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TEX26Q8N6G2 289 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 OR2L3Q8NG85 312 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 OR52B4Q8NGK2 314 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 OR5H6Q8NGV6 325 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 OR6X1Q8NH79 312 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 DTD1Q8TEA8 209 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 S100ZQ8WXG8 99 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ELMO1Q92556 727 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 SLCO2A1Q92959 643 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 HIST1H2ACQ93077 130 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.75□□□□□ -1.972e-7■■■■■ 62.8
USP28-210ENST00000542033 SLC35C1Q96A29 364 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ECHDC3Q96DC8 303 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TCEAL4Q96EI5 215 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MOCOSQ96EN8 888 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MRPL48Q96GC5 212 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 TPD52L3Q96J77 140 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PPP1R2P1Q96PQ5 205 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TAAR1Q96RJ0 339 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PCDHB18PQ96TA0 734 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 IL12RB2Q99665 862 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ECSITQ9BQ95 431 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CBWD1Q9BRT8 395 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CCDC90BQ9GZT6 254 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 UPF3AQ9H1J1 476 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 GAL3ST2Q9H3Q3 398 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 SAV1Q9H4B6 383 aaPredicted RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 EGLN3Q9H6Z9 239 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ZNF665Q9H7R5 613 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MCCC2Q9HCC0 563 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 VAT1LQ9HCJ6 419 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 SAR1AQ9NR31 198 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CTPS2Q9NRF8 586 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PLEK2Q9NYT0 353 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 GLTPQ9NZD2 209 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TMEM9Q9P0T7 183 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ZNF319Q9P2F9 582 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ABCD2Q9UBJ2 740 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MRTO4Q9UKD2 239 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms