RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SIRPAP78324 504 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 EPS8Q12929 822 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 BNIP1Q12981 228 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 QPRTQ15274 297 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 TOMM34Q15785 309 aaPredicted RBP7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 FXNQ16595 210 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 RAET1LQ5VY80 246 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 ANKRD34AQ69YU3 496 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 CHMP1BQ7LBR1 199 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 POC1BQ8TC44 478 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 WNT2BQ93097 391 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 TAMM41Q96BW9 452 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 CDRT15Q96T59 188 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 KCTD14Q9BQ13 255 aaPredicted RBP7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 OPN3Q9H1Y3 402 aaPredicted RBP7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 YAE1D1Q9NRH1 226 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 ACER3Q9NUN7 267 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 RLIMQ9NVW2 624 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 TAS2R1Q9NYW7 299 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 ADA2Q9NZK5 511 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 STOML1Q9UBI4 398 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 USP22Q9UPT9 525 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 AP4B1Q9Y6B7 739 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 JMJD1CQ15652 2540 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 HIVEP2P31629 2446 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 CR1P17927 2039 aa7.78□□□□□ -1.16
CLSTN3-212ENST00000541770 A0A1W2PNV4 684 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 CXCR6O00574 342 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 MSTNO14793 375 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 TPST1O60507 370 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 ATP5HO75947 161 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 OPN1SWP03999 348 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 GKN3PP0CG01 181 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 PEPDP12955 493 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 UQCRBP14927 111 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF708P17019 499 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 GGT1P19440 569 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 CD247P20963 164 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 FKBP2P26885 142 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 RYKP34925 604 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 APOBEC1P41238 236 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 HTR3AP46098 478 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 MAP2K6P52564 334 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 SESN3P58005 492 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 RAC1P63000 192 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 FOXF1Q12946 379 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 NRF1Q16656 503 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 DUSP7Q16829 419 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 GLIPR1L2Q4G1C9 344 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 EEF1A1P5Q5VTE0 462 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 VWA1Q6PCB0 445 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 RINLQ6ZS11 566 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 GRINAQ7Z429 371 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 MEIOBQ8N635 442 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 LSMEM1Q8N8F7 131 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 SMYD1Q8NB12 490 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 GPR32P1Q8NGA4 272 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF563Q8TA94 476 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC26A7Q8TE54 656 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF524Q96C55 264 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 RNF145Q96MT1 663 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 NPAS1Q99742 590 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 KLHL4Q9C0H6 718 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 CXorf56Q9H5V9 222 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 GMPR2Q9P2T1 348 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 CLCF1Q9UBD9 225 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC13A4Q9UKG4 626 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 BAG5Q9UL15 447 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 PRPF19Q9UMS4 504 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF337Q9Y3M9 751 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 MED12Q93074 2177 aa7.77□□□□□ -1.17
CLSTN3-212ENST00000541770 ERICH4A6NGS2 130 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 AP3D1O14617 1153 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 GSTA4O15217 222 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 FMO6PO60774 539 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 GMNNO75496 209 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 TNFSF13O75888 250 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 TGM6O95932 706 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 FESP07332 822 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 ME2P23368 584 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 UGT2B10P36537 528 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC1A3P43003 542 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 IDH2P48735 452 aaKnown RBP7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 RASSF2P50749 326 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 CLDN18P56856 261 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 COPZ1P61923 177 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SELENOWP63302 87 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 KRTAP1-1Q07627 177 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SELENBP1Q13228 472 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 CLEC12BQ2HXU8 276 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 EXOC3L2Q2M3D2 409 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 DNAL1Q4LDG9 190 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 LRRC23Q53EV4 343 aaPredicted RBP7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 GLYATQ6IB77 296 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 WBP2NLQ6ICG8 309 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms