RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RNH1P13489 461 aaKnown RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 POU2F1P14859 743 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PVRP15151 417 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 TPSB2P20231 275 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PCMT1P22061 227 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ACVR1BP36896 505 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 HMGCS2P54868 508 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 GSCP56915 257 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 SEC61GP60059 68 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ACY1Q03154 408 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PUDPQ08623 228 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 TPSAB1Q15661 275 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 DPYSL2Q16555 572 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 C14orf28Q4W4Y0 310 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 TEX44Q53QW1 395 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 MS4A13Q5J8X5 152 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 LGSNQ5TDP6 509 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 SEL1L2Q5TEA6 688 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 FAM71F2Q6NXP2 309 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 METAP1DQ6UB28 335 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 CYS1Q717R9 158 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ATP6V0D2Q8N8Y2 350 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 OR1F12Q8NHA8 337 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 C11orf45Q8TAV5 145 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PHOSPHO2Q8TCD6 241 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 IFT74Q96LB3 600 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 GLT1D1Q96MS3 346 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 TSNARE1Q96NA8 513 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 CHCHD5Q9BSY4 110 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 TMEM121Q9BTD3 319 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 SPATA16Q9BXB7 569 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ROPN1BQ9BZX4 212 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PARLQ9H300 379 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 LRRN3Q9H3W5 708 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 SLC2A8Q9NY64 477 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 SPATA7Q9P0W8 599 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ADAM28Q9UKQ2 775 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 IFT52Q9Y366 437 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 NPTNQ9Y639 398 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PTPRZ1P23471 2315 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 PRRC2BQ5JSZ5 2229 aaKnown RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ELP1O95163 1332 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 HEATR9A2RTY3 570 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ERICH4A6NGS2 130 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 OR52A4PA6NMU1 304 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF716A6NP11 495 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 NR5A2O00482 541 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 LSM1O15116 133 aaKnown RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 RAMP1O60894 148 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CABYRO75952 493 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 B3GAT3O94766 335 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 SLC25A27O95847 323 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 NDUFB10O96000 172 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 F10P00742 488 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 IGHG1P01857 330 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF735P0CB33 412 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ZSCAN5DPP0CG00 497 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 SELEP16581 610 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 XRCC1P18887 633 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 SERPINA2P20848 420 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ANXA13P27216 316 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 YWHABP31946 246 aaKnown RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 PRRX1P54821 245 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 RIPPLY1Q0D2K3 151 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 FCHO2Q0JRZ9 810 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CALCOCO2Q13137 446 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ELAVL3Q14576 367 aaKnown RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 SLC10A1Q14973 349 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 NDUFA9Q16795 377 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CYP51A1Q16850 503 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CFAP221Q4G0U5 840 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CTSL3PQ5NE16 218 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 PDZK1Q5T2W1 519 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 PRAMEF20Q5VT98 475 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 OR4F3Q6IEY1 312 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 FAHD2BQ6P2I3 314 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 EMBQ6PCB8 327 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 KDM7AQ6ZMT4 941 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CENPQQ7L2Z9 268 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 TPRA1Q86W33 373 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ZNRF1Q8ND25 227 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 CRYGNQ8WXF5 182 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 MOCOSQ96EN8 888 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 C11orf24Q96F05 449 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 PELI1Q96FA3 418 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 FAHD2AQ96GK7 314 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF597Q96LX8 424 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 C9orf85Q96MD7 179 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 PSMB7Q99436 277 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 NPY6RQ99463 290 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 JPT2Q9H910 190 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 AMBNQ9NP70 447 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 EXOSC3Q9NQT5 275 aaKnown RBP3.43□□□□□ -1.86
SNHG1-217ENST00000541578 SMOXQ9NWM0 555 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 BFARQ9NZS9 450 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 MUTYHQ9UIF7 546 aa3.43□□□□□ -1.86
SNHG1-217ENST00000541578 COPS3Q9UNS2 423 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms