RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CDC123O75794 336 aaPredicted RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 SEC14L2O76054 403 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 OR6B1O95007 311 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 IFNGP01579 166 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 IGKV3-11P04433 115 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CT62P0C5K7 136 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 ZGLP1P0C6A0 271 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CT45A8P0DMV1 189 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CT45A9P0DMV2 189 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 ELK4P28324 431 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 SSTR4P31391 388 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 HTR3AP46098 478 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 PCYT1AP49585 367 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CTBP2P56545 445 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 FOXL2P58012 376 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 PRKCDQ05655 676 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 DYNC1I2Q13409 638 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 LAPTM4AQ15012 233 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 NCF4Q15080 339 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 OR1Q1Q15612 314 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 TBCEQ15813 527 aaPredicted RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 EXT1Q16394 746 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 SYT16Q17RD7 645 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 DEFB113Q30KQ7 82 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 KLHL26Q53HC5 615 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CT45A2Q5DJT8 189 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 B3GNTL1Q67FW5 361 aaPredicted RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 C12orf73Q69YU5 71 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 WBP2NLQ6ICG8 309 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 IGFL2Q6UWQ7 119 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 HSDL2Q6YN16 418 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 RTL4Q6ZR62 310 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 LINC00299Q6ZSB3 139 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 TMPRSS11FQ6ZWK6 438 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 ZER1Q7Z7L7 766 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 MRGPREQ86SM8 312 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 ENTHD1Q8IYW4 607 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CLIP4Q8N3C7 705 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CLEC1AQ8NC01 280 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 B3GNT7Q8NFL0 401 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 OR2T33Q8NG76 320 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 OR9Q2Q8NGE9 314 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 OR9Q1Q8NGQ5 310 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 STT3BQ8TCJ2 826 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 BRIX1Q8TDN6 353 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 TMEM239Q8WW34 195 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 TMCO6Q96DC7 493 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 MRPL48Q96GC5 212 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 VMP1Q96GC9 406 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 NIPSNAP1Q9BPW8 284 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 RBCK1Q9BYM8 510 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 KRTAP17-1Q9BYP8 105 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 VN1R1Q9GZP7 353 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 SOX17Q9H6I2 414 aaPredicted RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 IL20Q9NYY1 176 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 RHCGQ9UBD6 479 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 DHCR7Q9UBM7 475 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 REV1Q9UBZ9 1251 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 WARS2Q9UGM6 360 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 PSORS1C1Q9UIG5 152 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 RNF6Q9Y252 685 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CDH10Q9Y6N8 788 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 GXYLT2A0PJZ3 443 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 UNC119BA6NIH7 251 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 OR6C70A6NIJ9 312 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 VSTM2BA6NLU5 285 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 EFCAB9A8MZ26 197 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MEN1O00255 615 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 PHF1O43189 567 aaPredicted RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZNF264O43296 627 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 IDH3BO43837 385 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 AHCYL1O43865 530 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MAN1A2O60476 641 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 REM1O75628 298 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZFAND5O76080 213 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MED26O95402 600 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CDK1P06493 297 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 RAB40ALP0C0E4 278 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ICAM2P13598 275 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 POU2F1P14859 743 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 PGCP20142 388 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 PAICSP22234 425 aaKnown RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 MMP11P24347 488 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 FKBP2P26885 142 aaKnown RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 DCKP27707 260 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MSX1P28360 303 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 GSTT1P30711 240 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 GRK5P34947 590 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 POLR2IP36954 125 aaKnown RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 SERPINB10P48595 397 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZNF136P52737 540 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 SUMO3P55854 103 aaPredicted RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 SLC26A5P58743 744 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CDK5Q00535 292 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 PLCXD2Q0VAA5 305 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MYBPHQ13203 477 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 GINS1Q14691 196 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 SEC23BQ15437 767 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 SNAPC1Q16533 368 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CTU2Q2VPK5 515 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms