RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 OR52D1Q9H346 318 aa15.39■□□□□ 0.05
COPS3-212ENST00000539941 TVP23BQ9NYZ1 205 aa15.39■□□□□ 0.05
COPS3-212ENST00000539941 CNOT2Q9NZN8 540 aaKnown RBP15.39■□□□□ 0.05
COPS3-212ENST00000539941 ENPP5Q9UJA9 477 aa15.39■□□□□ 0.05
COPS3-212ENST00000539941 PCDHGB6Q9Y5F9 930 aa15.39■□□□□ 0.05
COPS3-212ENST00000539941 EFCAB10A6NFE3 127 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 TNFSF15O95150 251 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 HMGN1P05114 100 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 BMP7P18075 431 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 CSRP1P21291 193 aaKnown RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 CRYZQ08257 329 aaKnown RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 SNAPC1Q16533 368 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 PGGHGQ32M88 737 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 TMPRSS12Q86WS5 348 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 SVOPQ8N4V2 548 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 TCEANCQ8N8B7 351 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 GRPEL2Q8TAA5 225 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 SGCDQ92629 289 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 SPACA9Q96E40 222 aaPredicted RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 SGTBQ96EQ0 304 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 SIGLEC11Q96RL6 698 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 NAA50Q9GZZ1 169 aaKnown RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 SIGLEC7Q9Y286 467 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 M0R129 80 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 MAN1A2O60476 641 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 PTP4A3O75365 173 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 HPP00738 406 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 KRT8P05787 483 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 PIPP12273 146 aaPredicted RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 GP1BBP13224 206 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 PTNP21246 168 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 MST1P26927 711 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 ITPKBP27987 946 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 RCVRNP35243 200 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 MVKQ03426 396 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 C19orf57Q0VDD7 668 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 SMARCD3Q6STE5 483 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 OPN5Q6U736 354 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 USP43Q70EL4 1123 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 CYP4Z2PQ8N1L4 340 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 TMEM163Q8TC26 289 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 IL4I1Q96RQ9 567 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 COPS4Q9BT78 406 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 TP63Q9H3D4 680 aaPredicted RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 SDHAF3Q9NRP4 125 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 ERVK-18Q9QC07 812 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 BAIAP2Q9UQB8 552 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 YARS2Q9Y2Z4 477 aaKnown RBP15.38■□□□□ 0.05
COPS3-212ENST00000539941 KNTC1P50748 2209 aa15.38■□□□□ 0.05
COPS3-212ENST00000539941 TP53I11O14683 189 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 TERTO14746 1132 aaKnown RBP15.37■□□□□ 0.05
COPS3-212ENST00000539941 PRKYO43930 277 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 RAD1O60671 282 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 CD82P27701 267 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 MSX1P28360 303 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 OTX2P32243 289 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 GRK5P34947 590 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 PPP5CP53041 499 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 GAS1P54826 345 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 RPS18P62269 152 aaKnown RBP15.37■□□□□ 0.05
COPS3-212ENST00000539941 ZNF181Q2M3W8 571 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 TMEM44Q2T9K0 475 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 CLEC12AQ5QGZ9 265 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 XAF1Q6GPH4 301 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 AHSA2Q719I0 299 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 OR5M3Q8NGP4 307 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 OR13C2Q8NGS9 318 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 GPR119Q8TDV5 335 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 DUSP19Q8WTR2 217 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 LIPHQ8WWY8 451 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 GGHQ92820 318 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 FGF11Q92914 225 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 SAMD8Q96LT4 415 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 SECISBP2Q96T21 854 aaKnown RBP15.37■□□□□ 0.05
COPS3-212ENST00000539941 CCDC90BQ9GZT6 254 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 UBQLN3Q9H347 655 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 NEK6Q9HC98 313 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 ZNF160Q9HCG1 818 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 ZNF229Q9UJW7 825 aa15.37■□□□□ 0.05
COPS3-212ENST00000539941 IGKV1D-42A0A075B6H8 117 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 IGLV3-32A0A0A0MS00 114 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 SNTNA6NMZ2 147 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 STMND1H3BQB6 276 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 SNPHO15079 494 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 TLX2O43763 284 aaPredicted RBP15.36■□□□□ 0.05
COPS3-212ENST00000539941 ENTPD6O75354 484 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 ITGA10O75578 1167 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 CRYZL1O95825 349 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 NUDT14O95848 222 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 PTTG1O95997 202 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 PCMT1P22061 227 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 TACR3P29371 465 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 DLSTP36957 453 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 HTR3AP46098 478 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 FXYD6P3P58550 94 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 PIGFQ07326 219 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 CHAF1BQ13112 559 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 ZNF791Q3KP31 576 aaPredicted RBP15.36■□□□□ 0.05
COPS3-212ENST00000539941 SLC30A6Q6NXT4 461 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 TMEM81Q6P7N7 255 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms