RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 YIPF5Q969M3 257 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 VOPP1Q96AW1 172 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 TMEM159Q96B96 161 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 MOAP1Q96BY2 351 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CCDC120Q96HB5 630 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 COQ10AQ96MF6 247 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 OR2A7Q96R45 310 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 GFM1Q96RP9 751 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SECISBP2Q96T21 854 aaKnown RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 MENTQ9BUN1 341 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 DPCDQ9BVM2 203 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 IFT27Q9BW83 186 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 FAIM2Q9BWQ8 316 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SERHL2Q9H4I8 314 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 RDH8Q9NYR8 311 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 CALML5Q9NZT1 146 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 H2AFY2Q9P0M6 372 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 TAAR2Q9P1P5 351 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 PTGFRNQ9P2B2 879 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 RHCGQ9UBD6 479 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 SEC14L3Q9UDX4 400 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 HS3ST2Q9Y278 367 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 KLF2Q9Y5W3 355 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 MUC22E2RYF6 1773 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-204ENST00000539847 PTPN13Q12923 2485 aa7.07□□□□□ -1.28
CCDC60-204ENST00000539847 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 A0A1B0GUH1 482 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 C17orf113A0A1B0GUU1 675 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 PLSCR5A0PG75 271 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TSPAN11A1L157 253 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 GSAPA4D1B5 854 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MEGF11A6BM72 1044 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 LRRN3E7EW58 273 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 SMLR1H3BR10 107 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 HMGN4O00479 90 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 KPNA3O00505 521 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 SURF4O15260 269 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MID1O15344 667 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 FZD7O75084 574 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 REM1O75628 298 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 C1orf105O95561 183 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 PRB1P04280 392 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 KLK1P06870 262 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 IFI30P13284 250 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 IFNGR1P15260 489 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 CELP19835 753 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 RAB3AP20336 220 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 NUP62P37198 522 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MNDAP41218 407 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 LSSP48449 732 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 PRLHRP49683 370 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ADPRHP54922 357 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MANFP55145 182 aaKnown RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TMPRSS3P57727 454 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ST3GAL3Q11203 375 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 RPA4Q13156 261 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 SNTB2Q13425 540 aaKnown RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 NFE2L1Q14494 772 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MAPK14Q16539 360 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF658BQ4V348 819 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 CCDC157Q569K6 752 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ADNP2Q6IQ32 1131 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TMEM81Q6P7N7 255 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 PCSK4Q6UW60 755 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 FAM198BQ6UWH4 519 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 LCTLQ6UWM7 567 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 LINC00114Q6XXX2 140 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 C3P1Q6ZMU1 363 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 WDR53Q7Z5U6 358 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ADCK2Q7Z695 626 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TSPAN33Q86UF1 283 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 GLCCI1Q86VQ1 547 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 GPR135Q8IZ08 494 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 STPG2Q8N412 459 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 RNF175Q8N4F7 328 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 OR4D11Q8NGI4 311 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 OR9A1PQ8NGU1 263 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 WDR48Q8TAF3 677 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 SUN3Q8TAQ9 357 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 PIGXQ8TBF5 258 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 GANCQ8TET4 914 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 SLC5A11Q8WWX8 675 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 CIDECQ96AQ7 238 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TM4SF18Q96CE8 201 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ARHGDIGQ99819 225 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TREX2Q9BQ50 279 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 DPH1Q9BZG8 443 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ABCG4Q9H172 646 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 ABCG8Q9H221 673 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 OR51B5Q9H339 312 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 LRRN3Q9H3W5 708 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MVB12BQ9H7P6 319 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 EVA1AQ9H8M9 152 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 PELI2Q9HAT8 420 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 KRCC1Q9NPI7 259 aaPredicted RBP7.06□□□□□ -1.28
CCDC60-204ENST00000539847 TRIM36Q9NQ86 728 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 MIEF1Q9NQG6 463 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 NUDT15Q9NV35 164 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 NLGN3Q9NZ94 848 aa7.06□□□□□ -1.28
CCDC60-204ENST00000539847 SERGEFQ9UGK8 458 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms