RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TRAPPC2P0DI81 140 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 TRAPPC2BP0DI82 140 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 FOXL2P58012 376 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 RPS11P62280 158 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 HHEXQ03014 270 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 EIF2B5Q13144 721 aaKnown RBP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 NDUFA5Q16718 116 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 PLA1AQ53H76 456 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 FAAP20Q6NZ36 180 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 RNF44Q7L0R7 432 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 KANSL1Q7Z3B3 1105 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF433Q8N7K0 673 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 JAM3Q9BX67 310 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF222Q9UK12 451 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 CACNG2Q9Y698 323 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF780AO75290 641 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 SC5DO75845 299 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 AHCYP23526 432 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 F8A1P23610 371 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 EDNRAP25101 427 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 HYAL4Q2M3T9 481 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 TMEM255AQ5JRV8 349 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 CEP78Q5JTW2 689 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 METAP1DQ6UB28 335 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 CBLN3Q6UW01 205 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 RTL4Q6ZR62 310 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 PXKQ7Z7A4 578 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 PRR22Q8IZ63 422 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 LGALS14Q8TCE9 139 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 SNX33Q8WV41 574 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 ELF4Q99607 663 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-210ENST00000539599 FLVCR2Q9UPI3 526 aa12.9□□□□□ -0.34
UBE3B-210ENST00000539599 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 NDUFB5O43674 189 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 F13BP05160 661 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 IGHV4-34P06331 123 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 NPR2P20594 1047 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 NANOS3P60323 173 aaKnown RBP12.89□□□□□ -0.35
UBE3B-210ENST00000539599 RPS15P62841 145 aaKnown RBP12.89□□□□□ -0.35
UBE3B-210ENST00000539599 UBE2IP63279 158 aaKnown RBP12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CCDC58Q4VC31 144 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 ZNF613Q6PF04 617 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 ZNF687Q8N1G0 1237 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 C16orf52Q8NHV5 167 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 RBM18Q96H35 190 aaKnown RBP12.89□□□□□ -0.35
UBE3B-210ENST00000539599 HSPA12BQ96MM6 686 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 GFI1Q99684 422 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 MAP3K3Q99759 626 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 SLC23A1Q9UHI7 598 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 ADAM30Q9UKF2 790 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CDC14CA4D256 554 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 FOXS1O43638 330 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 SLC43A1O75387 559 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 WNT1P04628 370 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CT45A8P0DMV1 189 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CT45A9P0DMV2 189 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 SLC6A6P31641 620 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 KCNAB1Q14722 419 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CD226Q15762 336 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CT45A2Q5DJT8 189 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 TCTE3Q8IZS6 198 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 C10orf53Q8N6V4 93 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 TOR1AIP2Q8NFQ8 470 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 OR11H4Q8NGC9 324 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 CEP76Q8TAP6 659 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 ZFAND1Q8TCF1 268 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 AKAP1Q92667 903 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBE3B-210ENST00000539599 YIPF5Q969M3 257 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 Q96M85 177 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 VSTM2LQ96N03 204 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 NOX4Q9NPH5 578 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 ANKRD10Q9NXR5 420 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
UBE3B-210ENST00000539599 TEX13CA0A0J9YWL9 993 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 DCTN6O00399 190 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 PIN1P1O15428 100 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 OR2B3O76000 313 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 SEMA4FO95754 770 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 CSTAP01040 98 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 IFNA16P05015 189 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 AQP2P41181 271 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 RAB38P57729 211 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 BDH1Q02338 343 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 CDK5R1Q15078 307 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 SFRP4Q6FHJ7 346 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-210ENST00000539599 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-210ENST00000539599 MOGAT1Q96PD6 335 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 RPS6KB2Q9UBS0 482 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms