RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 C12orf71A8MTZ7 269 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 PLA2G10O15496 165 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 KIR2DL3P43628 341 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 OR3A3P47888 321 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 NR0B1P51843 470 aaKnown RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 EMP2P54851 167 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 CLDN6P56747 220 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 WDR88Q6ZMY6 472 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 RRM2BQ7LG56 351 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 GRAMD2AQ8IUY3 354 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 ACOT11Q8WXI4 607 aaPredicted RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 KIAA1143Q96AT1 154 aaPredicted RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 KCTD7Q96MP8 289 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 CNIH4Q9P003 139 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 TESQ9UGI8 421 aaKnown RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 YARS2Q9Y2Z4 477 aaKnown RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 COL5A1P20908 1838 aaPredicted RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 COL27A1Q8IZC6 1860 aaPredicted RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 TEX51A0A1B0GUA7 166 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 TRAPPC13A5PLN9 417 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 PIP5K1CO60331 668 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 IL33O95760 270 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 ACAA2P42765 397 aaKnown RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 HLA-DQA1Q5Y7H0 255 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 NAXDQ8IW45 347 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 NRMQ8IXM6 262 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 UBE2J2Q8N2K1 259 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 FAM109AQ8N4B1 249 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 METTL21AQ8WXB1 218 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 SNAPC3Q92966 411 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 FAM46AQ96IP4 442 aaKnown RBP15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 LRR1Q96L50 414 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 ADOQ96SZ5 270 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 DHRS9Q9BPW9 319 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 MED18Q9BUE0 208 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 GON7Q9BXV9 100 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 WWTR1Q9GZV5 400 aa15.64■□□□□ 0.09
PCDHB17P-201ENST00000539533 SMIM30A4D0T7 59 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 SERINC4A6NH21 518 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 OR6C70A6NIJ9 312 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 LYPD3O95274 346 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 PRKACBP22694 351 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 OMPP47874 163 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 RPS25P62851 125 aaKnown RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ALDH6A1Q02252 535 aaKnown RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 SPEM2Q0P670 501 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 MADCAM1Q13477 382 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 QPRTQ15274 297 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC25A30Q5SVS4 291 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 MRPL14Q6P1L8 145 aaKnown RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 CD300LDQ6UXZ3 194 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 GATSQ8NAP1 163 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ENKURQ8TC29 256 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF582Q96NG8 517 aaPredicted RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 KATNB1Q9BVA0 655 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC39A1Q9NY26 324 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 FMO6PO60774 539 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF780AO75290 641 aaPredicted RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 PSMD4P55036 377 aaKnown RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 WNT4P56705 351 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 COX10Q12887 443 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 KLHL26Q53HC5 615 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 C3orf38Q5JPI3 329 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 APOOLQ6UXV4 268 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC29A4Q7RTT9 530 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 SUMF1Q8NBK3 374 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 GRHL3Q8TE85 626 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 C8orf44Q96CB5 159 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 C1GALT1C1Q96EU7 318 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 CRB3Q9BUF7 120 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 EDEM2Q9BV94 578 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ULBP3Q9BZM4 244 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF223Q9UK11 482 aaPredicted RBP15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF318Q5VUA4 2279 aa15.63■□□□□ 0.09
PCDHB17P-201ENST00000539533 A0A1W2PQ72 361 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 REM1O75628 298 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 CSTAP01040 98 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 MYL12AP19105 171 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 HLA-DMAP28067 261 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 CCKBRP32239 447 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 DCAF7P61962 342 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 GINS1Q14691 196 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 LCN1P1Q5VSP4 162 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 MBOAT2Q6ZWT7 520 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 KIF18BQ86Y91 864 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 SYT14Q8NB59 555 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 APCDD1LQ8NCL9 501 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 NFAM1Q8NET5 270 aaPredicted RBP15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 ATP6V1C2Q8NEY4 427 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 PIGXQ8TBF5 258 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 GNPDA2Q8TDQ7 276 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 TM9SF4Q92544 642 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 AP3S1Q92572 193 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 TTC9Q92623 222 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 MAP6Q96JE9 813 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 CMKLR1Q99788 373 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF559Q9BR84 538 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC26A1Q9H2B4 701 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 UBQLN4Q9NRR5 601 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms