RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KPNA2P52292 529 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 DVL1P1P54792 670 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 KCNK10P57789 538 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 HILS1P60008 231 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP10-6P60371 365 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 B2MP61769 119 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 UBE2IP63279 158 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ADARB1P78563 741 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 EWSR1Q01844 656 aaKnown RBP eCLIP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ST3GAL3Q11203 375 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OVGP1Q12889 678 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CUL1Q13616 776 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PPP1R3AQ16821 1122 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 Q1RN00 199 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SCARA5Q6ZMJ2 495 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 GDPGP1Q6ZNW5 385 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RGS9BPQ6ZS82 235 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ASCL5Q7RTU5 278 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 DPY19L4Q7Z388 723 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 MOB3BQ86TA1 216 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PSTKQ8IV42 348 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 NAXDQ8IW45 347 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 MYOCDQ8IZQ8 938 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CLEC4FQ8N1N0 589 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SAMD12Q8N8I0 201 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 UBAC2Q8NBM4 344 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OR6S1Q8NH40 331 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ADAMTS16Q8TE57 1224 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 C17orf50Q8WW18 174 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 DNASE2BQ8WZ79 361 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 FAM3CQ92520 227 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RASL10AQ92737 203 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 BADQ92934 168 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 HAVCR1Q96D42 359 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 BTN2A3PQ96KV6 586 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 TTC25Q96NG3 672 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 GAL3ST1Q99999 423 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 NRIP2Q9BQI9 281 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CHRDL1Q9BU40 450 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ANGPTL4Q9BY76 406 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PUS3Q9BZE2 481 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 JPT2Q9H910 190 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PARVGQ9HBI0 331 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SIGLEC8Q9NYZ4 499 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF639Q9UID6 485 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SPTBN5Q9NRC6 3674 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SMARCA2P51531 1590 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SCAF11Q99590 1463 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RTEL1-TNFRSF6BF6WH68 1400 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 YEATS2Q9ULM3 1422 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 STRCP1A6NGW2 1772 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RP1L1Q8IWN7 2480 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SBNO1A3KN83 1393 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CPDO75976 1380 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 KIAA0232Q92628 1395 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RPAP1Q9BWH6 1393 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RIMS1Q86UR5 1692 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CNTNAP2Q9UHC6 1331 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 IGKV2D-30A0A075B6S6 120 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 IGHV3OR16-9A0A0B4J2B5 98 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC30A6NM36 301 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 TCP11X1B4DZS4 312 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RRP8O43159 456 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SCN2BO60939 215 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RBBP9O75884 186 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OR2F2O95006 317 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 IGSF6O95976 241 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 IGHV3-23P01764 117 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 IGF1P05019 195 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 UGT1A3P35503 534 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PCK1P35558 622 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 HAAOP46952 286 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PLTPP55058 493 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 HERVK_113P61574 105 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RPL10AP62906 217 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 NTHL1P78549 312 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OTUD4Q01804 1114 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 EXOSC2Q13868 293 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 TIGITQ495A1 244 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 MRPL2Q5T653 305 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RTL6Q6ICC9 239 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF497Q6ZNH5 498 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CENPQQ7L2Z9 268 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 H2BFWTQ7Z2G1 175 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CAMK2N1Q7Z7J9 78 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 DHDDSQ86SQ9 333 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CDC20BQ86Y33 519 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 GPR65Q8IYL9 337 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SAXO1Q8IYX7 474 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PYROXD2Q8N2H3 581 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RNF10Q8N5U6 811 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 FAM184AQ8NB25 1140 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OR2T33Q8NG76 320 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OR6T1Q8NGN1 323 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OR13F1Q8NGS4 319 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 OR8K3Q8NH51 312 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RPLP0P6Q8NHW5 317 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF519Q8TB69 540 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 MITD1Q8WV92 249 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ANKRD7Q92527 254 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms