RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 DCTN4Q9UJW0 460 aa10.98□□□□□ -0.65
VAMP1-206ENST00000538970 CHD3Q12873 2000 aaKnown RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 CFAP73A6NFT4 308 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 H7C417 338 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 SDHDO14521 159 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 GPRIN2O60269 458 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 PGRP06401 933 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 DBIP07108 87 aaKnown RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 UQCRBP14927 111 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 ANXA11P50995 505 aaKnown RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 MAP2K6P52564 334 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 BST1Q10588 318 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 EPS8Q12929 822 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 STX3Q13277 289 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 GNA13Q14344 377 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 MAPK11Q15759 364 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 TNFAIP8L3Q5GJ75 292 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 COX20Q5RI15 118 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 MRPL2Q5T653 305 aaKnown RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 TSPO2Q5TGU0 170 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 C9orf135Q5VTT2 229 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 HMBOX1Q6NT76 420 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 ZNF544Q6NX49 715 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 PAQR6Q6TCH4 344 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 HIPK1Q86Z02 1210 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 FBXL14Q8N1E6 418 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 OR10H5Q8NGA6 315 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 PNPT1Q8TCS8 783 aaKnown RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 HTRA1Q92743 480 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 PMM1Q92871 262 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 TMEM45BQ96B21 275 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 NAA11Q9BSU3 229 aaPredicted RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 C1QTNF6Q9BXI9 259 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 SLC17A5Q9NRA2 495 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 PARPBPQ9NWS1 579 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 UPB1Q9UBR1 384 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 AMDHD2Q9Y303 409 aa10.97□□□□□ -0.65
VAMP1-206ENST00000538970 V9GYY5 206 aaPredicted RBP10.97□□□□□ -0.65
VAMP1-206ENST00000538970 DSPPQ9NZW4 1301 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 FAM234BA2RU67 622 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 A8MV72 311 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-206ENST00000538970 GSNP06396 782 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 IL7RP16871 459 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 FABP6P51161 128 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 DSCR9P59020 149 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 LRRC74AQ0VAA2 488 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 OTUD3Q5T2D3 398 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-206ENST00000538970 CLEC2AQ6UVW9 174 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 ZNF621Q6ZSS3 439 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 SPATA19Q7Z5L4 167 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 DEPDC4Q8N2C3 294 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 ZNF525Q8N782 197 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 OR52E6Q96RD3 313 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 ADAM19Q9H013 955 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 MTHFD2LQ9H903 347 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-206ENST00000538970 GPR45Q9Y5Y3 372 aa10.96□□□□□ -0.65
VAMP1-206ENST00000538970 CDHR4A6H8M9 788 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 LIPT2A6NK58 231 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 AQP7P3A6NL99 342 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ELOA3DA6NLF2 546 aaPredicted RBP10.95□□□□□ -0.66
VAMP1-206ENST00000538970 AKR7A3O95154 331 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 GPIP06744 558 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 NR2F1P10589 423 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 EPHA3P29320 983 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 MPGP29372 298 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 MVDP53602 400 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 TGFBR3Q03167 851 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 LOXL1Q08397 574 aaPredicted RBP10.95□□□□□ -0.66
VAMP1-206ENST00000538970 CEACAM7Q14002 265 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 RAB35Q15286 201 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 GSTA3Q16772 222 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM249Q2WGJ8 235 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ELOA3BQ3SY89 546 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 LIN52Q52LA3 116 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 C6orf52Q5T4I8 152 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ZNF836Q6ZNA1 936 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 PEX5LQ8IYB4 626 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ZNF440Q8IYI8 595 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM99Q8N816 258 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ZIC4Q8N9L1 334 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ELOA3Q8NG57 546 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 OR9K2Q8NGE7 335 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ZBTB18Q99592 522 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 SF3B5Q9BWJ5 86 aaKnown RBP10.95□□□□□ -0.66
VAMP1-206ENST00000538970 CENPHQ9H3R5 247 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 WDR55Q9H6Y2 383 aaPredicted RBP10.95□□□□□ -0.66
VAMP1-206ENST00000538970 FKRPQ9H9S5 495 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 KCNK9Q9NPC2 374 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 SLC6A13Q9NSD5 602 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 RLIMQ9NVW2 624 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 P2RX2Q9UBL9 471 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ATP23Q9Y6H3 246 aa10.95□□□□□ -0.66
VAMP1-206ENST00000538970 ATP6V1G2-DDX39BF2Z307 99 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 RFXANKO14593 260 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 HDAC3O15379 428 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 KRT75O95678 551 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 SLC25A16P16260 332 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms