RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CBFBQ13951 182 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 FCRLBQ6BAA4 426 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 LRRN1Q6UXK5 716 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 DEFB128Q7Z7B8 93 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 TMEM239Q8WW34 195 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 ASB13Q8WXK3 278 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 MYLIPQ8WY64 445 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 BARX1Q9HBU1 254 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 ZNF304Q9HCX3 659 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 NOX4Q9NPH5 578 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 CLDND1Q9NY35 253 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 RASL12Q9NYN1 266 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 INSL5Q9Y5Q6 135 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 HEATR5BQ9P2D3 2071 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 TRBV2A0A0J9YWF9 115 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 LRIT2A6NDA9 550 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 F8W036 122 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 C8orf89P0DMQ9 161 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 CSNK2A2P19784 350 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 GABRR2P28476 465 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 MNDAP41218 407 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 ZNF136P52737 540 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 ILF3Q12906 894 aaKnown RBP eCLIP17.14■□□□□ 0.332e-6■■■■□ 24
SFSWAP-207ENST00000538548 C18orf63Q68DL7 685 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 WDR88Q6ZMY6 472 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 FRRS1Q6ZNA5 592 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 CYB561A3Q8NBI2 242 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 BPIFCQ8NFQ6 507 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 OR4C6Q8NH72 309 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 SYNPRQ8TBG9 265 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 PXYLP1Q8TE99 480 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 MRI1Q9BV20 369 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 RNF208Q9H0X6 261 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 K7ESM1 405 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 LCMT2O60294 686 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 GYPBP06028 91 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 MGMTP16455 207 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 FAUP35544 74 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 GPR85P60893 370 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 ERVK-25P63136 954 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 HFEQ30201 348 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 DCAF12L2Q5VW00 463 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 PWWP2BQ6NUJ5 590 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 ZNF836Q6ZNA1 936 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 RANBP3LQ86VV4 465 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 NSMAFQ92636 917 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 HAVCR1Q96D42 359 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 PDCD1LG2Q9BQ51 273 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 ACTRT3Q9BYD9 372 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 AICDAQ9GZX7 198 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 CACYBPQ9HB71 228 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 SIGLEC7Q9Y286 467 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 IRAK3Q9Y616 596 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 EYSQ5T1H1 3165 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 A0A1W2PR48 441 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 MAGEB4O15481 346 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 EGFP01133 1207 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 PTHLHP12272 177 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 ZNF613Q6PF04 617 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 TSSK4Q6SA08 328 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 MOB3CQ70IA8 216 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 LSRQ86X29 649 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 OR13C2Q8NGS9 318 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 ADAMTS15Q8TE58 950 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 TFGQ92734 400 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 SLC19A3Q9BZV2 496 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 SEMA4CQ9C0C4 833 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 MTHFD2LQ9H903 347 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 POT1Q9NUX5 634 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 COA4Q9NYJ1 87 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 IL36AQ9UHA7 158 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 ATG4BQ9Y4P1 393 aa17.13■□□□□ 0.33
SFSWAP-207ENST00000538548 NUMA1Q14980 2115 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 A0A1W2PS29 197 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 PRSS44E7EML9 344 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 LEFTY2O00292 366 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 RASGRP1O95267 797 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 CDK2P24941 298 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 MPIP34949 423 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 HSD17B2P37059 387 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 ARHGDIBP52566 201 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 GAREM2Q75VX8 874 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 ADIPOR2Q86V24 386 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 ZNF433Q8N7K0 673 aaPredicted RBP17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 SLC35A4Q96G79 324 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 GPR34Q9UPC5 381 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 PIN1P1O15428 100 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 GPRIN2O60269 458 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 PAPLNO95428 1278 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 EDNRAP25101 427 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 HCCSP53701 268 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 STX4Q12846 297 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 TMEM35AQ53FP2 167 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 TMPRSS11FQ6ZWK6 438 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 TMEM25Q86YD3 366 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 CDK20Q8IZL9 346 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 MUC20Q8N307 709 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms