RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SERINC4A6NH21 518 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 PRAMEF2O60811 474 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 NDUFB2O95178 105 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 PTHLHP12272 177 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ACAA2P42765 397 aaKnown RBP7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ATP12AP54707 1039 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 PPP3R1P63098 170 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ARHGAP40Q5TG30 622 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 GARNL3Q5VVW2 1013 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 C1QL3Q5VWW1 255 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ULK3Q6PHR2 472 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 CHRDL2Q6WN34 429 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 NR2C2APQ86WQ0 139 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 RBM12BQ8IXT5 1001 aaKnown RBP7.99□□□□□ -1.13
UBE3B-208ENST00000538070 RDH10Q8IZV5 341 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 LNX2Q8N448 690 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 TRMT10AQ8TBZ6 339 aaKnown RBP7.99□□□□□ -1.13
UBE3B-208ENST00000538070 NR4A3Q92570 626 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 MSLNLQ96KJ4 702 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 STACQ99469 402 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 TMEM5Q9Y2B1 443 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 UGT2A1Q9Y4X1 527 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 IQCMA0A1B0GVH7 501 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ARHGEF9O43307 516 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 NKX2-2O95096 273 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 HIST1H2ABP04908 130 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 EIF4EP06730 217 aaKnown RBP7.99□□□□□ -1.13
UBE3B-208ENST00000538070 DCNP07585 359 aaKnown RBP7.99□□□□□ -1.13
UBE3B-208ENST00000538070 OR8G3PP0DMU2 310 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 CT45A9P0DMV2 189 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 IL12BP29460 328 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 HTR3AP46098 478 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 SKP1P63208 163 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 CDC20Q12834 499 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 CT45A2Q5DJT8 189 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 TMEM53Q6P2H8 277 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 TSSK4Q6SA08 328 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 HIST3H2AQ7L7L0 130 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 MARCH3Q86UD3 253 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 GKN2Q86XP6 184 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 OR4D9Q8NGE8 314 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 OR5H6Q8NGV6 325 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 THAP4Q8WY91 577 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 HIST1H2ACQ93077 130 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ADAD1Q96M93 576 aaKnown RBP7.99□□□□□ -1.13
UBE3B-208ENST00000538070 MOGAT1Q96PD6 335 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ULBP3Q9BZM4 244 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 ANKRD19PQ9H560 264 aa7.99□□□□□ -1.13
UBE3B-208ENST00000538070 A0A087WV62 115 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TMEM72A0PK05 275 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 PLA2G10O15496 165 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 LYRM1O43325 122 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 LANCL1O43813 399 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 GDI2P50395 445 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 BIKQ13323 160 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 GRM7Q14831 915 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TATDN3Q17R31 274 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 FAM69BQ5VUD6 431 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF550Q7Z398 422 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 SLC35F2Q8IXU6 374 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 OR6N2Q8NGY6 317 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 BRIX1Q8TDN6 353 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TXNDC15Q96J42 360 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ABCG5Q9H222 651 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 MTCH2Q9Y6C9 303 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 MUC22E2RYF6 1773 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 OR6C68A6NDL8 312 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 KLF4O43474 513 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TFP02787 698 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 DRD5P21918 477 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ETV6P41212 452 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 CAPZBP47756 277 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 GBX2P52951 348 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF85Q03923 595 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 GALEQ14376 348 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TOMM34Q15785 309 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 TMEM44Q2T9K0 475 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 MZT2BQ6NZ67 158 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 VASH1Q7L8A9 365 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 YIPF7Q8N8F6 280 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ZNF486Q96H40 463 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 VSTM2LQ96N03 204 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 CNN2Q99439 309 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 RNF121Q9H920 327 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ADGRL4Q9HBW9 690 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 GALNT9Q9HCQ5 603 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 CUTCQ9NTM9 273 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ADAM30Q9UKF2 790 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 PLCL2Q9UPR0 1127 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 PRRC2CQ9Y520 2896 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 IGHV1OR15-9A0A0B4J2B8 117 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 CHURC1-FNTBB4DL54 471 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 B4DXG7 233 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 HOXC4P09017 264 aaPredicted RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 ENDOUP21128 410 aaKnown RBP7.98□□□□□ -1.13
UBE3B-208ENST00000538070 S1PR1P21453 382 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 FNTBP49356 437 aa7.98□□□□□ -1.13
UBE3B-208ENST00000538070 SFXN4Q6P4A7 337 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms