RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SLC35B4Q969S0 331 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 TAMM41Q96BW9 452 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 ZNF607Q96SK3 696 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
PRKDC-206ENST00000536429 SPATA5L1Q9BVQ7 753 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
PRKDC-206ENST00000536429 TRAPPC4Q9Y296 219 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 BBIP1A8MTZ0 92 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 A8MVM7 634 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 M0QX08 132 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 M0R3H8 397 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 CASKO14936 926 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 DNPH1O43598 174 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 AKR7A3O95154 331 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 ADAP00813 363 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 IGHV3-9P01782 118 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 CD247P20963 164 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 PTNP21246 168 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 DRD4P21917 467 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 LOXP28300 417 aaPredicted RBP11.66□□□□□ -0.54
PRKDC-206ENST00000536429 ADSLP30566 484 aaPredicted RBP11.66□□□□□ -0.54
PRKDC-206ENST00000536429 IDUAP35475 653 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 OR3A2P47893 321 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 P2RY4P51582 365 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 SLC35A1P78382 337 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 EGR4Q05215 589 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 CYLC2Q14093 348 aaPredicted RBP11.66□□□□□ -0.54
PRKDC-206ENST00000536429 PDK3Q15120 406 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 NPTX1Q15818 432 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 MMEL1Q495T6 779 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 FBXW10Q5XX13 1052 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 GALNT5Q7Z7M9 940 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 TREML1Q86YW5 311 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 RBM45Q8IUH3 476 aaKnown RBP11.66□□□□□ -0.54
PRKDC-206ENST00000536429 TMEM99Q8N816 258 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 RCN3Q96D15 328 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 ZHX1-C8orf76Q96EF9 292 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 POTEKPQ9BYX7 375 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 ACTR6Q9GZN1 396 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 FAM107BQ9H098 131 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 PLEKHF2Q9H8W4 249 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 PLEKHA6Q9Y2H5 1048 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 FREM1Q5H8C1 2179 aa11.66□□□□□ -0.54
PRKDC-206ENST00000536429 IGKV1D-42A0A075B6H8 117 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 PRORSD1PA6NEY8 169 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 CCT8L1PA6NM43 557 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 SERPINB7O75635 380 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 LGI1O95970 557 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 PSMB1P20618 241 aaKnown RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 CRYGSP22914 178 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 MAP2K6P52564 334 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 SLC16A1P53985 500 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 RGS8P57771 180 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 SLC17A1Q14916 467 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 MAPRE2Q15555 327 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 VMACQ2NL98 169 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 OTUD3Q5T2D3 398 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 PAQR6Q6TCH4 344 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 C6orf89Q6UWU4 347 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 SPATA21Q7Z572 469 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 TSPYL5Q86VY4 417 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 LSMEM1Q8N8F7 131 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 OR8J3Q8NGG0 315 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 OR52E4Q8NGH9 312 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 PIGXQ8TBF5 258 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 S100PBPQ96BU1 408 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 KTI12Q96EK9 354 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 PIK3IP1Q96FE7 263 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 ZNF583Q96ND8 569 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 ARHGDIGQ99819 225 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 TACO1Q9BSH4 297 aaKnown RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 ADPRHL2Q9NX46 363 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 SEC14L4Q9UDX3 406 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 GPR52Q9Y2T5 361 aa11.65□□□□□ -0.54
PRKDC-206ENST00000536429 NOSIPQ9Y314 301 aaKnown RBP11.65□□□□□ -0.54
PRKDC-206ENST00000536429 AQP7P3A6NL99 342 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 FTCDNL1E5RQL4 147 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 SLC22A2O15244 555 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 KLF4O43474 513 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 EIF1BO60739 113 aaKnown RBP11.64□□□□□ -0.55
PRKDC-206ENST00000536429 LYZL6O75951 148 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 GPIP06744 558 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 COX4I1P13073 169 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 IGHV1-2P23083 117 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 LSP1P33241 339 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 RPS5P46782 204 aaKnown RBP11.64□□□□□ -0.55
PRKDC-206ENST00000536429 IST1P53990 364 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 FOXG1P55316 489 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-206ENST00000536429 TESK1Q15569 626 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 OR1Q1Q15612 314 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 NRF1Q16656 503 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 SFRP5Q5T4F7 317 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 ALKBH2Q6NS38 261 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 Q6ZT83 130 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 WFDC8Q8IUA0 241 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF100Q8IYN0 542 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 ZIC4Q8N9L1 334 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms