RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SHISA9B4DS77 424 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 INAFM1C9JVW0 142 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 GSNP06396 782 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 KITP10721 976 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 BMP4P12644 408 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 EDNRAP25101 427 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 IL12AP29459 219 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 CDKN1AP38936 164 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 CDKN2CP42773 168 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 CRATP43155 626 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 EPS8Q12929 822 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 LARS2Q15031 903 aaKnown RBP11.56□□□□□ -0.56
RTN3-207ENST00000536011 PGGHGQ32M88 737 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 RNF220Q5VTB9 566 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 KLHL24Q6TFL4 600 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 ABHD12BQ7Z5M8 362 aaPredicted RBP11.56□□□□□ -0.56
RTN3-207ENST00000536011 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
RTN3-207ENST00000536011 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 NEUROG1Q92886 237 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 ITCHQ96J02 903 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 SF3B5Q9BWJ5 86 aaKnown RBP11.56□□□□□ -0.56
RTN3-207ENST00000536011 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 PIF1Q9H611 641 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 ZIM2Q9NZV7 527 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 ZNF232Q9UNY5 417 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 AMDHD2Q9Y303 409 aa11.56□□□□□ -0.56
RTN3-207ENST00000536011 CADP27708 2225 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 DNHD1Q96M86 4753 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 A0A096LPI6 279 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 TMEM72A0PK05 275 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 CDHR4A6H8M9 788 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 RAMP1O60894 148 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 ADAM11O75078 769 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 ERLIN1O75477 346 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 THBS1P07996 1170 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 ZCCHC18P0CG32 403 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 CD40P25942 277 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 ZNF83P51522 516 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 WDR4P57081 412 aaKnown RBP11.55□□□□□ -0.56
RTN3-207ENST00000536011 DSTNP60981 165 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 PLAURQ03405 335 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 SLC17A1Q14916 467 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 COX20Q5RI15 118 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 OTUD3Q5T2D3 398 aaPredicted RBP11.55□□□□□ -0.56
RTN3-207ENST00000536011 WBP2NLQ6ICG8 309 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 FBXL14Q8N1E6 418 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 POMGNT2Q8NAT1 580 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 DNAJA3Q96EY1 480 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 MAELQ96JY0 434 aaKnown RBP11.55□□□□□ -0.56
RTN3-207ENST00000536011 MUS81Q96NY9 551 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 DHRS9Q9BPW9 319 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 TAPBPLQ9BX59 468 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 ADAM19Q9H013 955 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 RAD21L1Q9H4I0 556 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 MANSC1Q9H8J5 431 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 FKRPQ9H9S5 495 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 SDR39U1Q9NRG7 319 aaPredicted RBP11.55□□□□□ -0.56
RTN3-207ENST00000536011 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 SLC25A15Q9Y619 301 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 DSPPQ9NZW4 1301 aa11.55□□□□□ -0.56
RTN3-207ENST00000536011 OR6C65A6NJZ3 312 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 A8MVM7 634 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 M0R1B8 84 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 UBDO15205 165 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 VAMP5O95183 116 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 WNT11O96014 354 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 BCHEP06276 602 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 IMPDH2P12268 514 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 NCF2P19878 526 aaPredicted RBP11.54□□□□□ -0.56
RTN3-207ENST00000536011 PAX7P23759 505 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 ACVR1BP36896 505 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 DSCR9P59020 149 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 GABRA6Q16445 453 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 C6orf10Q5SRN2 563 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 ZNF544Q6NX49 715 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 MIER2Q8N344 545 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 CADM2Q8N3J6 435 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 TPT1P8Q9HAU6 139 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 ZNF443Q9Y2A4 671 aaPredicted RBP11.54□□□□□ -0.56
RTN3-207ENST00000536011 IFT52Q9Y366 437 aa11.54□□□□□ -0.56
RTN3-207ENST00000536011 A0A0G2JPF8 293 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 LIPT2A6NK58 231 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 AQP7P3A6NL99 342 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 HNRNPCL2B2RXH8 293 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 HNRNPCL3B7ZW38 293 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 PDLIM1O00151 329 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 TLX2O43763 284 aaPredicted RBP11.53□□□□□ -0.56
RTN3-207ENST00000536011 HNRNPCL1O60812 293 aaKnown RBP11.53□□□□□ -0.56
RTN3-207ENST00000536011 KRT33AO76009 404 aa11.53□□□□□ -0.56
RTN3-207ENST00000536011 CD8AP01732 235 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms