RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ANGPT1Q15389 498 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 ARMC6Q6NXE6 501 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 UNQ9370/PRO34162Q6UXP9 181 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 NPEPL1Q8NDH3 523 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 OR51L1Q8NGJ5 315 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 MRPL38Q96DV4 380 aaKnown RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 C7orf50Q9BRJ6 194 aaKnown RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 TCEAL2Q9H3H9 227 aaPredicted RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 NRIP3Q9NQ35 241 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 RABL2AQ9UBK7 228 aaPredicted RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 ING4Q9UNL4 249 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 RABL2BQ9UNT1 228 aa14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 MRPS33Q9Y291 106 aaKnown RBP14.71□□□□□ -0.06
CHMP1A-202ENST00000535997 CT45A8P0DMV1 189 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 CT45A9P0DMV2 189 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 RAG2P55895 527 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 HSF2Q03933 536 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 FAM53BQ14153 422 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 BTBD16Q32M84 506 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 CT45A2Q5DJT8 189 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 FAM205BPQ63HN1 556 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 LYPD4Q6UWN0 246 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF767PQ75MW2 155 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 TAF8Q7Z7C8 310 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF595Q8IYB9 648 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 HSD17B8Q92506 261 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 ZFP3Q96NJ6 502 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 SLC19A3Q9BZV2 496 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 POMT2Q9UKY4 750 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 MRPS7Q9Y2R9 242 aaKnown RBP14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF337Q9Y3M9 751 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 ADAM18Q9Y3Q7 739 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 HSPB11Q9Y547 144 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 LRP4O75096 1905 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 KNL1Q8NG31 2342 aa14.7□□□□□ -0.06
CHMP1A-202ENST00000535997 TRAV6A0A075B6T7 132 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SERINC4A6NH21 518 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF879B4DU55 563 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 LRRN3E7EW58 273 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 HRKO00198 91 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 GNB5O14775 395 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CTDSPLO15194 276 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 AKR7A2O43488 359 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SRPX2O60687 465 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 PRAMEF2O60811 474 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CSTAP01040 98 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SNRPBP14678 240 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SRMP19623 302 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 STOMP27105 288 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 NAA10P41227 235 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 PRPS1P60891 318 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 IGLV3-21P80748 117 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 HHEXQ03014 270 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 IL10RAQ13651 578 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 FCN2Q15485 313 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 HSD17B12Q53GQ0 312 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SYT9Q86SS6 491 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 MCATQ8IVS2 390 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SIAH3Q8IW03 269 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 OR4D9Q8NGE8 314 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SPACA7Q96KW9 195 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF578Q96N58 590 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 NMNAT3Q96T66 252 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CACNG6Q9BXT2 260 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 NMNAT2Q9BZQ4 307 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 LRRN3Q9H3W5 708 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF275Q9NSD4 429 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 NCDNQ9UBB6 729 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 GNG8Q9UK08 70 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 DTX4Q9Y2E6 619 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 A0A0A6YYC8 382 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 A0A1B0GTQ1 180 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SMLR1H3BR10 107 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 TGFBR3LH3BV60 316 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 I3L1I5 382 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CLDN4O14493 209 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 FABP7O15540 132 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 GSTZ1O43708 216 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 TMEM127O75204 238 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SEMA4FO95754 770 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CTSBP07858 339 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CD3GP09693 182 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 TYRP1P17643 537 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 EDNRAP25101 427 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 GPR3P46089 330 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF267Q14586 743 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SHHQ15465 462 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 PRTGQ2VWP7 1150 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 SLC22A10Q63ZE4 541 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 NPSR1Q6W5P4 371 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF761Q86XN6 746 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 OR4C3Q8NH37 302 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 ADAMTS14Q8WXS8 1223 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 OR2M2Q96R28 347 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 OR14A2Q96R54 314 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 TTTY10Q9BZA0 68 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 RANBP3Q9H6Z4 567 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 LRIT1Q9P2V4 623 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 CLEC4AQ9UMR7 237 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms