RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 A0A1B0GVT2 93 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 E9PI62 339 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 NDUFB2O95178 105 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 PPICP45877 212 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 DMWDQ09019 674 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 IL18Q14116 193 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 VWA2Q5GFL6 755 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 PLXDC1Q8IUK5 500 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 SLC7A5P1Q8MH63 180 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 ACOT12Q8WYK0 555 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 SLC7A6Q92536 515 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF524Q96C55 264 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 RNF31Q96EP0 1072 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 ZC3HAV1LQ96H79 300 aaKnown RBP12.24□□□□□ -0.45
VPS33B-202ENST00000535906 OR1F2PQ96R84 312 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 MARCH7Q9H992 704 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 UBQLN4Q9NRR5 601 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 ZMIZ1Q9ULJ6 1067 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 MMACHCQ9Y4U1 282 aa12.24□□□□□ -0.45
VPS33B-202ENST00000535906 IGKV1D-42A0A075B6H8 117 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 FAM172BPA6NC97 362 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 CENPXA8MT69 81 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SLC19A2O60779 497 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 IL33O95760 270 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 DDAH2O95865 285 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 IGKV3-11P04433 115 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 HPGDP15428 266 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 GLB1P16278 677 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 MAP2K3P46734 347 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 MTNR1BP49286 362 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF85Q03923 595 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 QPRTQ15274 297 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 CCDC92Q53HC0 331 aaPredicted RBP12.23□□□□□ -0.45
VPS33B-202ENST00000535906 UBE2J2Q8N2K1 259 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 D2HGDHQ8N465 521 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 PHOSPHO1Q8TCT1 267 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SLC2A12Q8TD20 617 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF721Q8TF20 911 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SMPDL3BQ92485 455 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 MVB12AQ96EY5 273 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SLC46A1Q96NT5 459 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 TRIM36Q9NQ86 728 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 HAO2Q9NYQ3 351 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 MALT1Q9UDY8 824 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 A0A0B4J293 547 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 A8MV72 311 aaPredicted RBP12.23□□□□□ -0.45
VPS33B-202ENST00000535906 DUX1O43812 170 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 IFNGP01579 166 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 DCNP07585 359 aaKnown RBP12.23□□□□□ -0.45
VPS33B-202ENST00000535906 RORAP35398 523 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 ADH7P40394 386 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 HCCSP53701 268 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SKP2Q13309 424 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SSX6Q7RTT6 188 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 PRSS58Q8IYP2 241 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 PRR22Q8IZ63 422 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 SLC43A2Q8N370 569 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 RFLNBQ8N5W9 214 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 FAM98AQ8NCA5 519 aaKnown RBP12.23□□□□□ -0.45
VPS33B-202ENST00000535906 OR51L1Q8NGJ5 315 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 OR5W2Q8NH69 310 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 ADIPOR1Q96A54 375 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 C4orf36Q96KX1 117 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 KLHDC3Q9BQ90 382 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 TMEM43Q9BTV4 400 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 NRSN2Q9GZP1 204 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 B3GAT2Q9NPZ5 323 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 ENAMQ9NRM1 1142 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 RBFOX1Q9NWB1 397 aaKnown RBP12.23□□□□□ -0.45
VPS33B-202ENST00000535906 FER1L5A0AVI2 2057 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 COL6A3P12111 3177 aa12.23□□□□□ -0.45
VPS33B-202ENST00000535906 K7ESF4 209 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 IMPA2O14732 288 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 UTS2O95399 124 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 UBL4AP11441 157 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 CD53P19397 219 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 CCR4P51679 360 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 OR12D2P58182 307 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 E2F1Q01094 437 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 FAAH2Q6GMR7 532 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 MZT2BQ6NZ67 158 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF440Q8IYI8 595 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 GPR135Q8IZ08 494 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 DUSP18Q8NEJ0 188 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 CLDN23Q96B33 292 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZMYND19Q96E35 227 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-202ENST00000535906 LCORQ96JN0 433 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ADOQ96SZ5 270 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 NDC1Q9BTX1 674 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 RTN4RQ9BZR6 473 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 PPIL3Q9H2H8 161 aaKnown RBP12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ERVMER34-1Q9H9K5 563 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 VPS13AQ96RL7 3174 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 TCRBV16S1A1N1A0A5B0 115 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 CDC14CA4D256 554 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 J3QLW9 94 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 SCDO00767 359 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms