RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SERPINB6P35237 376 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CA7P43166 264 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 GPR1P46091 355 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 GNPDA1P46926 289 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 KCNJ1P48048 391 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 GCLMP48507 274 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CASP4P49662 377 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 IST1P53990 364 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 RHOAP61586 193 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 BCL2L1Q07817 233 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 NME3Q13232 169 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CUL2Q13617 745 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 FAM189A2Q15884 450 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 C3AR1Q16581 482 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 STX1AQ16623 288 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 ECSCRQ19T08 205 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TPRG1LQ5T0D9 272 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SYPL2Q5VXT5 272 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 OR4C11Q6IEV9 310 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TMEM270Q6UE05 265 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TMEM64Q6YI46 380 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 C17orf107Q6ZR85 190 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 STRADAQ7RTN6 431 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TAC4Q86UU9 113 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 FAM131BQ86XD5 332 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 LAX1Q8IWV1 398 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 PHC2Q8IXK0 858 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 LYG1Q8N1E2 194 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 BBS5Q8N3I7 341 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 FBXW8Q8N3Y1 598 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SMYD1Q8NB12 490 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CCDC197Q8NCU1 140 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 OR6M1Q8NGM8 313 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CT55Q8WUE5 264 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TMEM158Q8WZ71 300 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SHC3Q92529 594 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 RASL10AQ92737 203 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 N4BP2L2Q92802 583 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 HAS2Q92819 552 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 HIST1H2ACQ93077 130 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SLC35C1Q96A29 364 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF514Q96K75 400 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 OR2M4Q96R27 311 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TM6SF2Q9BZW4 377 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 XPO4Q9C0E2 1151 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 DDX47Q9H0S4 455 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TUBB1Q9H4B7 451 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 ZSCAN16Q9H4T2 348 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 THYN1Q9P016 225 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SEC14L3Q9UDX4 400 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SMC3Q9UQE7 1217 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SLC17A4Q9Y2C5 497 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 COQ4Q9Y3A0 265 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 TMED7Q9Y3B3 224 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 NBEAL1Q6ZS30 2694 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SCN2AQ99250 2005 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 MN1Q10571 1320 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 SYNJ2BP-COX16A0A087WUM0 186 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 A0A087WYN8 130 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 TRAV17A0A0B4J275 112 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 A0A0D9SEW6 157 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 TSPAN11A1L157 253 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 GTPBP10A4D1E9 387 aaKnown RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 TRIM64A6NGJ6 449 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 TRIM64BA6NI03 449 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 A8MXK9 166 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 CASC3O15234 703 aaKnown RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 CFLARO15519 480 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 PSMD3O43242 534 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 KERAO60938 352 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 SCRG1O75711 98 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 ZMPSTE24O75844 475 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 ZFAND5O76080 213 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 OR6A2O95222 327 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 ANGPTL1O95841 491 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 ICAM2P13598 275 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 AREGP15514 252 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF30P17039 623 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 IL10P22301 178 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 AK4P27144 223 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 DUTP33316 252 aaKnown RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 SPRP35270 261 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 CLK1P49759 484 aaKnown RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 FHITP49789 147 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 CSNK1G2P78368 415 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 FKBP3Q00688 224 aaKnown RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 CALCOCO2Q13137 446 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 NFATC2Q13469 925 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 RFTN1Q14699 578 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 SLC25A52Q3SY17 297 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 PYCR3Q53H96 274 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 MUC21Q5SSG8 566 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 FAM199XQ6PEV8 388 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-202ENST00000535689 DOK6Q6PKX4 331 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 IGFL2Q6UWQ7 119 aa2.72□□□□□ -1.97
SNHG1-202ENST00000535689 ISLR2Q6UXK2 745 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms