RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 S100A8P05109 93 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 IL5P05113 134 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 HNRNPA1P09651 372 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP28-202ENST00000535607 UBBP0CG47 229 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 UBCP0CG48 685 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 GLULP15104 373 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 TYRP1P17643 537 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 CELP19835 753 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 PSMB1P20618 241 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 GIFP27352 417 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 HOXD9P28356 352 aaPredicted RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 AGTR1P30556 359 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 GKP32189 559 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 ATP5C1P36542 298 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 VIPR2P41587 438 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 CSNK1DP48730 415 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 AKR1D1P51857 326 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 PSMD4P55036 377 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 CDH11P55287 796 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 DLX5P56178 289 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 RPS27AP62979 156 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 UBA52P62987 128 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 EEF1A2Q05639 463 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 BCL2L1Q07817 233 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 GPM6BQ13491 265 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 HENMT1Q5T8I9 393 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 PLPP4Q5VZY2 271 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 C1orf94Q6P1W5 598 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 RNF44Q7L0R7 432 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 TSEN54Q7Z6J9 526 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 ABI3BPQ7Z7G0 1075 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 ZER1Q7Z7L7 766 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 GLCCI1Q86VQ1 547 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 THOC6Q86W42 341 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 SLC44A3Q8N4M1 653 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 LINC00469Q8N7U9 141 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 TEX19Q8NA77 164 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 POGLUT1Q8NBL1 392 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 ATAD1Q8NBU5 361 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 OR52H1Q8NGJ2 320 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 OR8K3Q8NH51 312 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 BBS10Q8TAM1 723 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 PIGXQ8TBF5 258 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 WDR20Q8TBZ3 569 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 SMAP2Q8WU79 429 aaPredicted RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 SLC25A43Q8WUT9 341 aaPredicted RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 ASZ1Q8WWH4 475 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 SORCS1Q8WY21 1168 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 OR5P2Q8WZ92 322 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 PHYHIPQ92561 330 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 SPSB4Q96A44 273 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 MRPL38Q96DV4 380 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 KLHL15Q96M94 604 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 NECTIN4Q96NY8 510 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 PKP4Q99569 1192 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 NPAS1Q99742 590 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 EFCAB11Q9BUY7 163 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 REG4Q9BYZ8 158 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 ABCG4Q9H172 646 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 METTL17Q9H7H0 456 aaPredicted RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 CERS4Q9HA82 394 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 FANCFQ9NPI8 374 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 MIEF1Q9NQG6 463 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 POLE3Q9NRF9 147 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 TMEM184CQ9NVA4 438 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 BABAM2Q9NXR7 383 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 SLCO1C1Q9NYB5 712 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 STOX2Q9P2F5 926 aaPredicted RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 P2RX2Q9UBL9 471 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 MGAT4CQ9UBM8 478 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 EXO1Q9UQ84 846 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 SLC22A14Q9Y267 594 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 EXOGQ9Y2C4 368 aaKnown RBP6.07□□□□□ -1.44
USP28-202ENST00000535607 CDH23Q9H251 3354 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 ATG2AQ2TAZ0 1938 aa6.07□□□□□ -1.44
USP28-202ENST00000535607 LOC105369274A0A096LPK9 316 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 TRAV1-2A0A0B4J238 106 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 A0A0D9SG52 128 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 A0A0G2JPF8 293 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 PLSCR5A0PG75 271 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 SLC22A23A1A5C7 686 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 AGAP14A8MT82 685 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 GRXCR1A8MXD5 290 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 HNRNPCL3B7ZW38 293 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 F5H697 171 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 GFYI3L273 518 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 J3KTA2 159 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 GTPBP1O00178 669 aaKnown RBP6.06□□□□□ -1.44
USP28-202ENST00000535607 ADAM12O43184 909 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 ZNF749O43361 778 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 TRIAP1O43715 76 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 PRAMEF2O60811 474 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 GCM2O75603 506 aaPredicted RBP6.06□□□□□ -1.44
USP28-202ENST00000535607 NCR1O76036 304 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 SOX14O95416 240 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 CXCL14O95715 111 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 C6orf47O95873 294 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 IGSF6O95976 241 aa6.06□□□□□ -1.44
USP28-202ENST00000535607 MT-ND5P03915 603 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms