RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 VPS37AQ8NEZ2 397 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 ROPN1LQ96C74 230 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 ADAD1Q96M93 576 aaKnown RBP7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 OR5B2Q96R09 309 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 OR52E6Q96RD3 313 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 KLHDC3Q9BQ90 382 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 RHNO1Q9BSD3 238 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 TRAF4Q9BUZ4 470 aaPredicted RBP7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 POLE3Q9NRF9 147 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 ACER3Q9NUN7 267 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 GID8Q9NWU2 228 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 LEF1Q9UJU2 399 aaPredicted RBP7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 SLC35A3Q9Y2D2 325 aa7.43□□□□□ -1.22
RPUSD4-209ENST00000534393 IGKV3D-15A0A087WSY6 115 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 IGHV3-15A0A0B4J1V0 119 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 CIB4A0PJX0 185 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 RNASET2O00584 256 aaKnown RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 ABCD4O14678 606 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SMAD9O15198 467 aaKnown RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 CD5LO43866 347 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 CYP7B1O75881 506 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 LYZL6O75951 148 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PGRP06401 933 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 THBS1P07996 1170 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SOAT1P35610 550 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 ACVR1BP36896 505 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 CDKN1AP38936 164 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 DIO1P49895 249 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SESN3P58005 492 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PSME3P61289 254 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 HBA1P69905 142 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 KRTAP1-1Q07627 177 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 MERTKQ12866 999 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 FAPQ12884 760 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SKP2Q13309 424 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 NFYCQ13952 458 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 GPR68Q15743 365 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PGGHGQ32M88 737 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 NDUFAF6Q330K2 333 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SYT14P1Q58G82 188 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 COQ5Q5HYK3 327 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PAGE3Q5JUK9 113 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SPANXN4Q5MJ08 99 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 FBXW9Q5XUX1 488 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 AP1ARQ63HQ0 302 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 OR7E24Q6IFN5 339 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SLC2A7Q6PXP3 512 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 DNM1P46Q6ZS02 220 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 C6orf120Q7Z4R8 191 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 RETREG3Q86VR2 466 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 HIPK1Q86Z02 1210 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 UBE2J2Q8N2K1 259 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 KBTBD8Q8NFY9 601 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 MIPOL1Q8TD10 442 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 APH1AQ96BI3 265 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 TESCQ96BS2 214 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 LRRC58Q96CX6 371 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 CDRT15Q96T59 188 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 HOPXQ9BPY8 73 aaPredicted RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 THUMPD3Q9BV44 507 aaKnown RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 MMADHCQ9H3L0 296 aaPredicted RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 RMND5AQ9H871 391 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 SLC52A3Q9NQ40 469 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 ADA2Q9NZK5 511 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PRSS50Q9UI38 385 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 ING1Q9UK53 422 aaPredicted RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PRDM4Q9UKN5 801 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 NOSIPQ9Y314 301 aaKnown RBP7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 HDGFL3Q9Y3E1 203 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 KCNE3Q9Y6H6 103 aa7.42□□□□□ -1.22
RPUSD4-209ENST00000534393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.224e-6■■■□□ 17.1
RPUSD4-209ENST00000534393 FBN1P35555 2871 aaKnown RBP7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 RNF103-CHMP3A0A140T963 221 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 A8MV72 311 aaPredicted RBP7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 FCMRO60667 390 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 RAMP1O60894 148 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 UGT2B17O75795 530 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 H6PDO95479 791 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 CPSF4O95639 269 aaKnown RBP7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 PMS2P2O95744 297 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 NPPAP01160 153 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 CD8AP01732 235 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 IGHV4-39P01824 125 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 UBTFL6P0CB48 400 aaPredicted RBP7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 TFPIP10646 304 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 IGHV1-2P23083 117 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 TTKP33981 857 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 HTR3AP46098 478 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 MAP2K6P52564 334 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 CDH11P55287 796 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 DPY19L1Q2PZI1 675 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 CHRFAM7AQ494W8 412 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 C6orf10Q5SRN2 563 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 ANXA8L1Q5VT79 327 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 OR4F3Q6IEY1 312 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 HMBOX1Q6NT76 420 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 SLC22A25Q6T423 547 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 CLEC2AQ6UVW9 174 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 SEZ6L2Q6UXD5 910 aa7.41□□□□□ -1.22
RPUSD4-209ENST00000534393 HACD2Q6Y1H2 254 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms