RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	GOLGA8N	F8WBI6	632 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GOLGA8R	I6L899	631 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	NDUFS8	O00217	210 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PLPP1	O14494	284 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	KLF11	O14901	512 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ADAMDEC1	O15204	470 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PFDN6	O15212	129 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PIN1P1	O15428	100 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PLPP2	O43688	288 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	FADS1	O60427	444 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TSPAN2	O60636	221 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	BANF1	O75531	89 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ERAL1	O75616	437 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	RAD51D	O75771	328 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PGM3	O95394	542 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SYNGR4	O95473	234 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	BCL10	O95999	233 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TUBB	P07437	444 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GRP	P07492	148 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CSF3	P09919	207 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM58BP	P0C7Q3	252 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	DHRS4L1	P0CG22	281 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CT45A8	P0DMV1	189 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CT45A9	P0DMV2	189 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CD1D	P15813	335 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GNAZ	P19086	355 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GGT1	P19440	569 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TCN1	P20061	433 aa	Predicted RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF10	P21506	573 aa	Predicted RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	DRD5	P21918	477 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GIF	P27352	417 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GALNS	P34059	522 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SFTPD	P35247	375 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SERPINF1	P36955	418 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CASP2	P42575	452 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SSR2	P43308	183 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CCT5	P48643	541 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	HSPA7	P48741	367 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TMED10	P49755	219 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	RGS4	P49798	205 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF134	P52741	427 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	RPS3A	P61247	264 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	LMO4	P61968	165 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	VSNL1	P62760	191 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GNGT1	P63211	74 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	BASP1	P80723	227 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	MRPS25	P82663	173 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TNFRSF17	Q02223	184 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CHRNB3	Q05901	458 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TGM3	Q08188	693 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CHIT1	Q13231	466 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	RCN2	Q14257	317 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	GANAB	Q14697	944 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	OASL	Q15646	514 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM189A2	Q15884	450 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TMEM44	Q2T9K0	475 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CT45A2	Q5DJT8	189 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF628	Q5EBL2	1059 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SH2D4B	Q5SQS7	431 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	C9orf135	Q5VTT2	229 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	KHDRBS2	Q5VWX1	349 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	HBM	Q6B0K9	141 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	KRTAP5-11	Q6L8G4	156 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	C11orf63	Q6NUN7	778 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF544	Q6NX49	715 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	NPSR1	Q6W5P4	371 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SLC46A3	Q7Z3Q1	461 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	BPIFB2	Q8N4F0	458 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF433	Q8N7K0	673 aa	Predicted RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	VPS37A	Q8NEZ2	397 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	OR4K14	Q8NGD5	310 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	OR2V1	Q8NHB1	315 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CLDND2	Q8NHS1	167 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM76A	Q8TAV0	307 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM110B	Q8TC76	370 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	IFT81	Q8WYA0	676 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TMCO6	Q96DC7	493 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	MUCL1	Q96DR8	90 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SNX22	Q96L94	193 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SERPINB12	Q96P63	405 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF300	Q96RE9	604 aa	Predicted RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	MTERF1	Q99551	399 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	RBM4B	Q9BQ04	359 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TMEM79	Q9BSE2	394 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF717	Q9BY31	904 aa	Predicted RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	POTEKP	Q9BYX7	375 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	DDX47	Q9H0S4	455 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	OR10A4	Q9H209	315 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	CXorf36	Q9H7Y0	433 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	NT5DC2	Q9H857	520 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	SMURF2	Q9HAU4	748 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	MYNN	Q9NPC7	610 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	TNFRSF19	Q9NS68	423 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	DDX28	Q9NUL7	540 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	INTS10	Q9NVR2	710 aa	Known RBP	2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	MAT2B	Q9NZL9	334 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	PRODH2	Q9UF12	536 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	OPN4	Q9UHM6	478 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF639	Q9UID6	485 aa		2.55	□□□□□ -2
CHMP4A-208	ENST00000534106	MID2	Q9UJV3	735 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms