RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 TCRBV5S2A0A599 114 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 TMEM72A0PK05 275 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 AHRRA9YTQ3 701 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 KDM4EB2RXH2 506 aaPredicted RBP11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 J3QKU1 62 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 ADAMDEC1O15204 470 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 ZNF682O95780 498 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 OPN1LWP04000 364 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 SEMG1P04279 462 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 INHBBP09529 407 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 COPZ1P61923 177 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 PM20D2Q8IYS1 436 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 ZPLD1Q8TCW7 415 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 ASB9Q96DX5 294 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 NSMCE2Q96MF7 247 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 UCN2Q96RP3 112 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 TUBA1CQ9BQE3 449 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 TMEM185BQ9H7F4 350 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 C12orf10Q9HB07 376 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 CHRNA9Q9UGM1 479 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 CAMK2AQ9UQM7 478 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 TMED7Q9Y3B3 224 aa11.44□□□□□ -0.58
RPUSD4-208ENST00000533628 WDR1O75083 606 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 PRKD3O94806 890 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 SRYQ05066 204 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 IQCCQ4KMZ1 466 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 IFI44LQ53G44 452 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 ENTPD8Q5MY95 495 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 C1QL3Q5VWW1 255 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 ZNF585AQ6P3V2 769 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 ZNF613Q6PF04 617 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 LINC00114Q6XXX2 140 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 SEM1Q6ZVN7 128 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 VASH1Q7L8A9 365 aaPredicted RBP11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 AMIGO2Q86SJ2 522 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 RANBP3LQ86VV4 465 aaPredicted RBP11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 RPRMLQ8N4K4 120 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 PRR7Q8TB68 274 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 SMPDL3BQ92485 455 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 KLHL15Q96M94 604 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 DMRTA2Q96SC8 542 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 AMBRA1Q9C0C7 1298 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 TP63Q9H3D4 680 aaPredicted RBP11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 COQ10BQ9H8M1 238 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 SAMD4AQ9UPU9 718 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 PRELID1Q9Y255 219 aa11.43□□□□□ -0.58
RPUSD4-208ENST00000533628 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ANKRD34BA5PLL1 514 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ZNF208O43345 1280 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 GMNNO75496 209 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 GABRA1P14867 456 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ACVR2AP27037 513 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 PCYT1AP49585 367 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 TMEM176BQ3YBM2 270 aaPredicted RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ACSF3Q4G176 576 aaPredicted RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 C3orf33Q6P1S2 294 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 POMZP3Q6PJE2 187 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 CYP2R1Q6VVX0 501 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 C3P1Q6ZMU1 363 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ESPNLQ6ZVH7 1005 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 UBQLNLQ8IYU4 475 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 PQLC1Q8N2U9 271 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 TSPAN14Q8NG11 270 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 DNAJA4Q8WW22 397 aaPredicted RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 GEMIN6Q8WXD5 167 aaKnown RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SLC38A4Q969I6 547 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 PYURFQ96I23 114 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 C7orf34Q96L11 122 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 TMEM27Q9HBJ8 222 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SERINC1Q9NRX5 453 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 MEMO1Q9Y316 297 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ESPL1Q14674 2120 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 KIAA1549Q9HCM3 1950 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ZC3H12DA2A288 527 aaKnown RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SEC14L5O43304 696 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 NPIPB7O75200 414 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 HOXD4P09016 255 aaPredicted RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SFTPDP35247 375 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 PTGER4P35408 488 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 MAP2K6P52564 334 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 CDH12P55289 794 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SRSF1Q07955 248 aaKnown RBP eCLIP11.42□□□□□ -0.587e-6■□□□□ 10.7
RPUSD4-208ENST00000533628 RGS21Q2M5E4 152 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 C4orf17Q53FE4 359 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SYT14P1Q58G82 188 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 C1orf185Q5T7R7 199 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ULK3Q6PHR2 472 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 DHFR2Q86XF0 187 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 OR2V1Q8NHB1 315 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ADAMTS16Q8TE57 1224 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 SLC25A43Q8WUT9 341 aaPredicted RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 CCDC124Q96CT7 223 aaKnown RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 ZNF845Q96IR2 970 aaPredicted RBP11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 PSD2Q9BQI7 771 aa11.42□□□□□ -0.58
RPUSD4-208ENST00000533628 OR11A1Q9GZK7 315 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms