RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ZNF814B7Z6K7 855 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 FMO6PO60774 539 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 FPR1P21462 350 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 CPA2P48052 419 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 FAM27E3Q08E93 113 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 PDK3Q15120 406 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 TMEM201Q5SNT2 666 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 NUFIP2Q7Z417 695 aaKnown RBP17.68■□□□□ 0.42
CPSF1-209ENST00000532725 RBM45Q8IUH3 476 aaKnown RBP17.68■□□□□ 0.42
CPSF1-209ENST00000532725 CCDC103Q8IW40 242 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 FITM2Q8N6M3 262 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 SLC38A4Q969I6 547 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 MCHR1Q99705 422 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 ELOVL5Q9NYP7 299 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 KLHL9Q9P2J3 617 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 ABCD2Q9UBJ2 740 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 TAGLN3Q9UI15 199 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 MPDZO75970 2070 aa17.68■□□□□ 0.42
CPSF1-209ENST00000532725 ANKHD1Q8IWZ3 2542 aaKnown RBP17.67■□□□□ 0.42
CPSF1-209ENST00000532725 A0A0B4J2E0 115 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 A0A1B0GX12 115 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ZNF724A8MTY0 619 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 NDUFAB1O14561 156 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 EIF1BO60739 113 aaKnown RBP17.67■□□□□ 0.42
CPSF1-209ENST00000532725 IFNA14P01570 189 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 PNMTP11086 282 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 IDUAP35475 653 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 KIR2DL3P43628 341 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 GSK3BP49841 420 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 SORDQ00796 357 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 CEACAM7Q14002 265 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ALG10BQ5I7T1 473 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 C1orf140Q5VVS0 124 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ABLIM2Q6H8Q1 611 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 RANBP3LQ86VV4 465 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ZNF775Q96BV0 537 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ZHX1-C8orf76Q96EF9 292 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 SLC47A1Q96FL8 570 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 TACO1Q9BSH4 297 aaKnown RBP17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ALG2Q9H553 416 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 SLC24A3Q9HC58 644 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 KCNN3Q9UGI6 736 aa17.67■□□□□ 0.42
CPSF1-209ENST00000532725 ABCA12Q86UK0 2595 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 IGKV3D-15A0A087WSY6 115 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 A0A087WUJ7 227 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 ELOA3DA6NLF2 546 aaPredicted RBP17.66■□□□□ 0.42
CPSF1-209ENST00000532725 ZNF716A6NP11 495 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 RAMP1O60894 148 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 GPIP06744 558 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 CD79BP40259 229 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 CDH12P55289 794 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 NCALDP61601 193 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 KRT72Q14CN4 511 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 OR7A5Q15622 319 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 ELOA3BQ3SY89 546 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 CYBRD1Q53TN4 286 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 PAQR6Q6TCH4 344 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 LINC00114Q6XXX2 140 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 CCDC197Q8NCU1 140 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 ELOA3Q8NG57 546 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 C14orf79Q96F83 325 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 ZNF300Q96RE9 604 aaPredicted RBP17.66■□□□□ 0.42
CPSF1-209ENST00000532725 PCDHAC1Q9H158 963 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 CRIM1Q9NZV1 1036 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 BAG5Q9UL15 447 aa17.66■□□□□ 0.42
CPSF1-209ENST00000532725 IGKV1D-42A0A075B6H8 117 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 TUBAL3A6NHL2 446 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 SLC16A1P53985 500 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 SELENOWP63302 87 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 ENTPD8Q5MY95 495 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 ZNF613Q6PF04 617 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 TSPYL5Q86VY4 417 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-209ENST00000532725 TMEM99Q8N816 258 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 MFSD8Q8NHS3 518 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 VANGL1Q8TAA9 524 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-209ENST00000532725 LINC01560Q8TB33 94 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 PIGXQ8TBF5 258 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 PROX1Q92786 737 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 KTI12Q96EK9 354 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-209ENST00000532725 NAA11Q9BSU3 229 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-209ENST00000532725 PTDSS2Q9BVG9 487 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 C12orf49Q9H741 205 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 SPAG4Q9NPE6 437 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 SH3GLB1Q9Y371 365 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 NAV2Q8IVL1 2488 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 APCP25054 2843 aa17.65■□□□□ 0.42
CPSF1-209ENST00000532725 FREM1Q5H8C1 2179 aa17.64■□□□□ 0.42
CPSF1-209ENST00000532725 FBN2P35556 2912 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 FTCDNL1E5RQL4 147 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 CXCR6O00574 342 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 AKR7A3O95154 331 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 LYPD3O95274 346 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 THY1P04216 161 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 NTF4P34130 210 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 CPOXP36551 454 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 P2RY4P51582 365 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 LRRC23Q53EV4 343 aaPredicted RBP17.64■□□□□ 0.41
CPSF1-209ENST00000532725 SWT1Q5T5J6 900 aaKnown RBP17.64■□□□□ 0.41
CPSF1-209ENST00000532725 CARM1Q86X55 608 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 TAPBPLQ9BX59 468 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms