RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CRYABP02511 175 aaKnown RBP10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ITGB2P05107 769 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 RAC2P15153 192 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 PDE7AQ13946 482 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 GFRALQ6UXV0 394 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 OR2I1PQ8NGU4 316 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 SYT3Q9BQG1 590 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 ATG4BQ9Y4P1 393 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 OR51B4Q9Y5P0 310 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 GABBR2O75899 941 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 RAB40BQ12829 278 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 EXD3Q8N9H8 876 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 OR51T1Q8NGJ9 327 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 TBCCD1Q9NVR7 557 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 NPFFR2Q9Y5X5 522 aa10.48□□□□□ -0.73
PTPRK-221ENST00000532331 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 LRIT2A6NDA9 550 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 OR6C76A6NM76 312 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 CHMP24386 653 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 FGL1Q08830 312 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 RIPPLY1Q0D2K3 151 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 SF3A2Q15428 464 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 GPR139Q6DWJ6 353 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 PODNL1Q6PEZ8 512 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF566Q969W8 418 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 OR52D1Q9H346 318 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 C12orf49Q9H741 205 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 MRPL15Q9P015 296 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ABRACLQ9P1F3 81 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 TMED7-TICAM2A0A0A6YYA0 188 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 AMY2AP04746 511 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 RAB3AP20336 220 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 GABRB3P28472 473 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 SLC36A2Q495M3 483 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ELMOD2Q8IZ81 293 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 MRI1Q9BV20 369 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 CACNG6Q9BXT2 260 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 NRSN2Q9GZP1 204 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF226Q9NYT6 803 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 YARS2Q9Y2Z4 477 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 TMED7Q9Y3B3 224 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 A8MV72 311 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 F5H0A9 414 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ZGLP1P0C6A0 271 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ARAFP10398 606 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 AKR1C4P17516 323 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 BMXP51813 675 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 PLGLAQ15195 96 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 CMPK2Q5EBM0 449 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 MORN4Q8NDC4 146 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 C16orf58Q96GQ5 468 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ZC3H10Q96K80 434 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 SLC29A1Q99808 456 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 OR52A5Q9H2C5 316 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 SLC23A2Q9UGH3 650 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 POMT2Q9UKY4 750 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 I3L521 148 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 SLC16A7O60669 478 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 CRTAPO75718 401 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ACTL6BO94805 426 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 ALDOCP09972 364 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 LSSP48449 732 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 NFATC3Q12968 1075 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 FZD2Q14332 565 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 NDUFAF7Q7L592 441 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 FAM217AQ8IXS0 508 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 CHPT1Q8WUD6 406 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 TCEAL2Q9H3H9 227 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 CCDC86Q9H6F5 360 aaKnown RBP10.47□□□□□ -0.73
PTPRK-221ENST00000532331 DECR2Q9NUI1 292 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 KLHL13Q9P2N7 655 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 REV1Q9UBZ9 1251 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 SERGEFQ9UGK8 458 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 DAPP1Q9UN19 280 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 B3GNT3Q9Y2A9 372 aa10.47□□□□□ -0.73
PTPRK-221ENST00000532331 TCRBV3S1A0A5B6 114 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 TIMM8AO60220 97 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-221ENST00000532331 B3GALT4O96024 378 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 ITGAMP11215 1152 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 CHRNB4P30926 498 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 IL11RAQ14626 422 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 BEST3Q8N1M1 668 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 MS4A6EQ96DS6 147 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 IFNA2P01563 188 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 DNASE1P24855 282 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 PRSS3P35030 304 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 COL28A1Q2UY09 1125 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 TMEM244Q5VVB8 128 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 TP53I13Q8NBR0 393 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-221ENST00000532331 CHDHQ8NE62 594 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-221ENST00000532331 CSNK2A3Q8NEV1 391 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 OR8J2Q8NGG1 315 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 NDRG3Q9UGV2 375 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 TRAV27A0A087WT01 109 aa10.46□□□□□ -0.73
PTPRK-221ENST00000532331 A0A1W2PQL4 384 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-221ENST00000532331 SMCO3A2RU48 225 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms