RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 NR4A3Q92570 626 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 MS4A6EQ96DS6 147 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 ARHGDIGQ99819 225 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 GINS4Q9BRT9 223 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 TAS2R5Q9NYW4 299 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 PCDHGA5Q9Y5G8 931 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 TRAV1-2A0A0B4J238 106 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 CDHR4A6H8M9 788 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 CLEC3AO75596 197 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 SPDEFO95238 335 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 ZGLP1P0C6A0 271 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 NRG3P56975 720 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 KRT33BQ14525 404 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
NXF1-213ENST00000532297 PDSS1Q5T2R2 415 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 MBOAT2Q6ZWT7 520 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 GDF7Q7Z4P5 450 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 SERPINA12Q8IW75 414 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 CDH26Q8IXH8 852 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 TEX19Q8NA77 164 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 OR52E1Q8NGJ3 308 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 ZCCHC10Q8TBK6 192 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 SUSD6Q92537 303 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 KISS1RQ969F8 398 aaPredicted RBP13.72□□□□□ -0.21
NXF1-213ENST00000532297 OR1F2PQ96R84 312 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 C12orf57Q99622 126 aa13.72□□□□□ -0.21
NXF1-213ENST00000532297 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
NXF1-213ENST00000532297 EXOSC3Q9NQT5 275 aaKnown RBP13.72□□□□□ -0.21
NXF1-213ENST00000532297 ZNF860A6NHJ4 632 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 EML2O95834 649 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 PRG2P13727 222 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 RGS8P57771 180 aaPredicted RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 AGERQ15109 404 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 TMEM52BQ4KMG9 183 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 ZNF660Q6AZW8 331 aaPredicted RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 DMKNQ6E0U4 476 aaPredicted RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 HDDC3Q8N4P3 179 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 RAB42Q8N4Z0 105 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 SLC16A11Q8NCK7 471 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 SLC41A3Q96GZ6 507 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 DERL3Q96Q80 235 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 OR52D1Q9H346 318 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 SLC27A6Q9Y2P4 619 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 PCDHGA9Q9Y5G4 932 aaKnown RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 OR5K4A6NMS3 321 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 HMSDA8MTL9 139 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 SYT5O00445 386 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 HPP00738 406 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 GKN3PP0CG01 181 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 HIST1H1TP22492 207 aaPredicted RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 SEC13P55735 322 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 TMEM64Q6YI46 380 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 RELL2Q8NC24 303 aaPredicted RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 NUP43Q8NFH3 380 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 OR5M1Q8NGP8 315 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 CDS1Q92903 461 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 TEAD3Q99594 435 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 MCHR1Q99705 422 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 PLEKHA1Q9HB21 404 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 MRPS30Q9NP92 439 aaKnown RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 PRDM7Q9NQW5 492 aa13.71□□□□□ -0.21
NXF1-213ENST00000532297 MRTO4Q9UKD2 239 aaKnown RBP13.71□□□□□ -0.21
NXF1-213ENST00000532297 GABARAPH6UMI1 98 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 SIGLEC6O43699 453 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 KRT33AO76009 404 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 IGF2P01344 180 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 HOXA1P49639 335 aaPredicted RBP13.71□□□□□ -0.22
NXF1-213ENST00000532297 ZNF85Q03923 595 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 PRDX1Q06830 199 aaKnown RBP13.71□□□□□ -0.22
NXF1-213ENST00000532297 PABPC1L2AQ5JQF8 200 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 AGBL4Q5VU57 503 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 HEPHL1Q6MZM0 1159 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 ZC3H14Q6PJT7 736 aaKnown RBP13.71□□□□□ -0.22
NXF1-213ENST00000532297 ADAMTSL4Q6UY14 1074 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 FCAMRQ8WWV6 532 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 PNPLA2Q96AD5 504 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 CAPN10Q9HC96 672 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 INPP5EQ9NRR6 644 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 OPN4Q9UHM6 478 aa13.71□□□□□ -0.22
NXF1-213ENST00000532297 MPTX1A8MV57 137 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 TYRP1P17643 537 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 TGM3Q08188 693 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 UBXN2BQ14CS0 331 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 ZNF613Q6PF04 617 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 OR56A1Q8NGH5 318 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 OR52L1Q8NGH7 329 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 FANK1Q8TC84 345 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 BRIX1Q8TDN6 353 aaKnown RBP13.7□□□□□ -0.22
NXF1-213ENST00000532297 C1QTNF2Q9BXJ5 285 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 DPH1Q9BZG8 443 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 NKX6-2Q9C056 277 aaPredicted RBP13.7□□□□□ -0.22
NXF1-213ENST00000532297 FBXO34Q9NWN3 711 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 KLHL28Q9NXS3 571 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 SLC7A7Q9UM01 511 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 H7C2Y5 167 aa13.7□□□□□ -0.22
NXF1-213ENST00000532297 ARL6IP5O75915 188 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms