RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TMEM200BQ69YZ2 307 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 TMEM211Q6ICI0 200 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 RPTNQ6XPR3 784 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF621Q6ZSS3 439 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 KCTD20Q7Z5Y7 419 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 MRGPRGQ86SM5 289 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 GALNT10Q86SR1 603 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 YRDCQ86U90 279 aaKnown RBP5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 MARCH3Q86UD3 253 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRIML2Q8N7C3 387 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 FAM83FQ8NEG4 500 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR4K17Q8NGC6 315 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR5D16Q8NGK9 328 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR5M9Q8NGP3 310 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR4C3Q8NH37 302 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 FAM110BQ8TC76 370 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 PHF10Q8WUB8 498 aaKnown RBP5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 RNF138Q8WVD3 245 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 THOC1Q96FV9 657 aaKnown RBP5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCDC120Q96HB5 630 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC35G5Q96KT7 338 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCDC115Q96NT0 180 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 HIST1H2AAQ96QV6 131 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR7D2Q96RA2 312 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 VKORC1Q9BQB6 163 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 EBF4Q9BQW3 602 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SIKE1Q9BRV8 207 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC35A5Q9BS91 424 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 INPP5KQ9BT40 448 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCDC28BQ9BUN5 200 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCDC106Q9BWC9 280 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SSBP4Q9BWG4 385 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 RTN4RQ9BZR6 473 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 HOXD1Q9GZZ0 328 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 PTGES2Q9H7Z7 377 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 RMND5AQ9H871 391 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 HHATLQ9HCP6 504 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 UBQLN4Q9NRR5 601 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 PNPLA3Q9NST1 481 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 EXD2Q9NVH0 621 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SPRR3Q9UBC9 169 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 DKKL1Q9UK85 242 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 FBXL2Q9UKC9 423 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC6A5Q9Y345 797 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 SHANK1Q9Y566 2161 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 CNTRLQ7Z7A1 2325 aa5.23□□□□□ -1.57
HMGB1P42-201ENST00000532126 TENM4Q6N022 2769 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 BAHCC1Q9P281 2608 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 RELNP78509 3460 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 C17orf51A8MQB3 221 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 H3BNH8 94 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 RFXANKO14593 260 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ADAM10O14672 748 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ATP8B1O43520 1251 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 GMFGO60234 142 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 EDF1O60869 148 aaKnown RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 WDR1O75083 606 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANP32DO95626 131 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 OXSR1O95747 527 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANGPTL1O95841 491 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ACTL6AO96019 429 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 AK1P00568 194 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 NGFRP08138 427 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 GABRA1P14867 456 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 BMP7P18075 431 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 TBXA2RP21731 343 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 DPP4P27487 766 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 SRD5A2P31213 254 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 PRKAR1BP31321 381 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 PTGER4P35408 488 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 THBS2P35442 1172 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 CDKN2CP42773 168 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 KHKP50053 298 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 NPY4RP50391 375 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANXA11P50995 505 aaKnown RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 POLR2JP52435 117 aaKnown RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 CAPZA1P52907 286 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 GAS1P54826 345 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 CASP9P55211 416 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 DSCR4P56555 118 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 GMFBP60983 142 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 IRX1P78414 480 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ADORA2A-AS1P86434 159 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 CRYZQ08257 329 aaKnown RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 SF3B4Q15427 424 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 TIGD2Q4W5G0 525 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 RUNDC3AQ59EK9 446 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 C6orf10Q5SRN2 563 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ATAD3BQ5T9A4 648 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 GKAP1Q5VSY0 366 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 SAXO2Q658L1 398 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ETFRF1Q6IPR1 90 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 TNFAIP8L2Q6P589 184 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 AAGABQ6PD74 315 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 XKRXQ6PP77 449 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 APOOLQ6UXV4 268 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ETV3LQ6ZN32 361 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 NCCRP1Q6ZVX7 275 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 C16orf62Q7Z3J2 963 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 IFNEQ86WN2 208 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms