RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DNAJA1P31689 397 aaKnown RBP11.25□□□□□ -0.61
COPB1-208ENST00000532088 CLDN18P56856 261 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 EGR4Q05215 589 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 MFSD13AQ14CX5 517 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 SF3B4Q15427 424 aaKnown RBP eCLIP11.25□□□□□ -0.617e-10■■■■■ 30.1
COPB1-208ENST00000532088 DCST1Q5T197 706 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 WDR88Q6ZMY6 472 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 MBOAT2Q6ZWT7 520 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 GGNQ86UU5 652 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 ST6GALNAC3Q8NDV1 305 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 OR4C15Q8NGM1 316 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 OR5M1Q8NGP8 315 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 SLC7A13Q8TCU3 470 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 PYDC1Q8WXC3 89 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 MIB2Q96AX9 1013 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 ADGRG7Q96K78 797 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 TIMP4Q99727 224 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 PSD2Q9BQI7 771 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 KLHL4Q9C0H6 718 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 KRCC1Q9NPI7 259 aaPredicted RBP11.25□□□□□ -0.61
COPB1-208ENST00000532088 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 SLC6A5Q9Y345 797 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 MED31Q9Y3C7 131 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 TESMINQ9Y4I5 508 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 A0A087WUU8 490 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 A0A1B0GTH9 108 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 SH3PXD2BA1X283 911 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 H0YHG0 523 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 TNFRSF11BO00300 401 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 GNGT2O14610 69 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 TIPRLO75663 272 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 DIRAS1O95057 198 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 WISP1O95388 367 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 PMS2P2O95744 297 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 MT-ND1P03886 318 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 HOXD4P09016 255 aaPredicted RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 IL11P20809 199 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 FPR1P21462 350 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 PTGS2P35354 604 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 PTGER4P35408 488 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 IDUAP35475 653 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 IFNGR2P38484 337 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 ERFP50548 548 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 CTBP2P56545 445 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 RPS3AP61247 264 aaKnown RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 CSNK2A1P68400 391 aaPredicted RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 RBPJQ06330 500 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 CTU2Q2VPK5 515 aaKnown RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 FAM69AQ5T7M9 428 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 WLSQ5T9L3 541 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 C1orf140Q5VVS0 124 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 Q6ZPB1 254 aaPredicted RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 TMPPEQ6ZT21 453 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 MFSD8Q8NHS3 518 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 ZPLD1Q8TCW7 415 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 LIPHQ8WWY8 451 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 CENPNQ96H22 339 aaPredicted RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 WDYHV1Q96HA8 205 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 ALPK1Q96QP1 1244 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 OSBPL10Q9BXB5 764 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 TIGARQ9NQ88 270 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 C6orf203Q9P0P8 240 aaPredicted RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 RHCGQ9UBD6 479 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 TMCC3Q9ULS5 477 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 TMEM5Q9Y2B1 443 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 ZNF835Q9Y2P0 537 aa11.24□□□□□ -0.61
COPB1-208ENST00000532088 SAMHD1Q9Y3Z3 626 aaKnown RBP11.24□□□□□ -0.61
COPB1-208ENST00000532088 ITPR1Q14643 2758 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 TLN1Q9Y490 2541 aaKnown RBP11.23□□□□□ -0.61
COPB1-208ENST00000532088 TRBV4-1A0A0J9YWV2 114 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 B8ZZF3 427 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 SMNDC1O75940 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
COPB1-208ENST00000532088 AHSA1O95433 338 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 GABRA1P14867 456 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 ARHGDIAP52565 204 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 UGT2B15P54855 530 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 RAC3P60763 192 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 PRKCDQ05655 676 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 ZNF239Q16600 458 aaKnown RBP11.23□□□□□ -0.61
COPB1-208ENST00000532088 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
COPB1-208ENST00000532088 PRR30Q53SZ7 412 aaPredicted RBP11.23□□□□□ -0.61
COPB1-208ENST00000532088 FGD3Q5JSP0 725 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 PODNL1Q6PEZ8 512 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 SHQ1Q6PI26 577 aaKnown RBP11.23□□□□□ -0.61
COPB1-208ENST00000532088 POMZP3Q6PJE2 187 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 GFRALQ6UXV0 394 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 ZNF730Q6ZMV8 503 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 FGD2Q7Z6J4 655 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 PQLC1Q8N2U9 271 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 SVOPLQ8N434 492 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 OR2V1Q8NHB1 315 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 TMEM255BQ8WV15 326 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
COPB1-208ENST00000532088 BBC3Q96PG8 261 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms