RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 AGAP6Q5VW22 663 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 NXNQ6DKJ4 435 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 PAQR6Q6TCH4 344 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 MGARPQ8TDB4 240 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 MAELQ96JY0 434 aaKnown RBP14.79□□□□□ -0.04
CPSF1-207ENST00000531727 AMBRA1Q9C0C7 1298 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 RLIMQ9NVW2 624 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 PARPBPQ9NWS1 579 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 DSPPQ9NZW4 1301 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 P2RX2Q9UBL9 471 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 UPB1Q9UBR1 384 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 DCTN4Q9UJW0 460 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 B3GALT5Q9Y2C3 310 aa14.79□□□□□ -0.04
CPSF1-207ENST00000531727 A0A1W2PR80 420 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 CDHR4A6H8M9 788 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 E7EQL1 145 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 ZNF500O60304 480 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-207ENST00000531727 ETFAP13804 333 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 MVDP53602 400 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 SPOCK1Q08629 439 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 NRF1Q16656 503 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 LIN52Q52LA3 116 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 ATG16L1Q676U5 607 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 SLC22A25Q6T423 547 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 VRK2Q86Y07 508 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 C17orf78Q8N4C9 275 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 C1orf162Q8NEQ5 155 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-207ENST00000531727 OR52P1PQ8NH57 321 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 SLC7A10Q9NS82 523 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 CALML5Q9NZT1 146 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 POU2F3Q9UKI9 436 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 HIVEP2P31629 2446 aa14.78□□□□□ -0.04
CPSF1-207ENST00000531727 M0R1B8 84 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 CRLF1O75462 422 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 GPIP06744 558 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 GKN3PP0CG01 181 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 ZCCHC18P0CG32 403 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 PTNP21246 168 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 CXCR1P25024 350 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 TTKP33981 857 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 ACAA2P42765 397 aaKnown RBP14.77□□□□□ -0.05
CPSF1-207ENST00000531727 CRATP43155 626 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 SLC18A1P54219 525 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 CEACAM7Q14002 265 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 OTUD3Q5T2D3 398 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-207ENST00000531727 TSPO2Q5TGU0 170 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 C11orf71Q6IPW1 123 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 ZNF836Q6ZNA1 936 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 MSANTD1Q6ZTZ1 278 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 DEPDC4Q8N2C3 294 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 WDR31Q8NA23 367 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 TMEM45BQ96B21 275 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 ADAD1Q96M93 576 aaKnown RBP14.77□□□□□ -0.05
CPSF1-207ENST00000531727 DHRS9Q9BPW9 319 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 SLC17A5Q9NRA2 495 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 CBLN4Q9NTU7 201 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 ZIM2Q9NZV7 527 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 ADAM21Q9UKJ8 722 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 CADP27708 2225 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 DNHD1Q96M86 4753 aa14.77□□□□□ -0.05
CPSF1-207ENST00000531727 LIPT2A6NK58 231 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 SSX4O60224 188 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 ANP32DO95626 131 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 TP53P04637 393 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-207ENST00000531727 BCHEP06276 602 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 TFPTP0C1Z6 253 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 CRISP3P54108 245 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 DSTNP60981 165 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 IRX1P78414 480 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-207ENST00000531727 TGFBR3Q03167 851 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 OR7A5Q15622 319 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 ZSWIM7Q19AV6 140 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 SLC9B1Q4ZJI4 515 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 C1QTNF12Q5T7M4 302 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 RNF220Q5VTB9 566 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 C9orf135Q5VTT2 229 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 WBP2NLQ6ICG8 309 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 B3GLCTQ6Y288 498 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 TMEM99Q8N816 258 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 OR9K2Q8NGE7 335 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 SLC38A5Q8WUX1 472 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 ITCHQ96J02 903 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 MDFIQ99750 246 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 RHNO1Q9BSD3 238 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 SF3B5Q9BWJ5 86 aaKnown RBP14.76□□□□□ -0.05
CPSF1-207ENST00000531727 C1QTNF6Q9BXI9 259 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 CACNG6Q9BXT2 260 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 RMND5AQ9H871 391 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 MANSC1Q9H8J5 431 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 TPT1P8Q9HAU6 139 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 SDR39U1Q9NRG7 319 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-207ENST00000531727 ZNF443Q9Y2A4 671 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-207ENST00000531727 AMDHD2Q9Y303 409 aa14.76□□□□□ -0.05
CPSF1-207ENST00000531727 TLN2Q9Y4G6 2542 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 AQP7P3A6NL99 342 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 AKR7A3O95154 331 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 MPGP29372 298 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 FABP6P51161 128 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 NUDT6P53370 316 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 COPZ1P61923 177 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms