RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RAI1Q7Z5J4 1906 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC4-210ENST00000531290 ETFAP13804 333 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 PTAFRP25105 342 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 CRISP3P54108 245 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 COPZ1P61923 177 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 LIN52Q52LA3 116 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLC22A25Q6T423 547 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 PAQR6Q6TCH4 344 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 VRK2Q86Y07 508 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 DEPDC4Q8N2C3 294 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 OR52E4Q8NGH9 312 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 ITCHQ96J02 903 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 MAELQ96JY0 434 aaKnown RBP19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 REG4Q9BYZ8 158 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 GRIP2Q9C0E4 1043 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLCO5A1Q9H2Y9 848 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 BARX1Q9HBU1 254 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 ZIM2Q9NZV7 527 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 ZNF232Q9UNY5 417 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLC25A15Q9Y619 301 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 USF3Q68DE3 2245 aa19.61■□□□□ 0.73
TRAPPC4-210ENST00000531290 NSD1Q96L73 2696 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 A0A1W2PR80 420 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 ZC3H12DA2A288 527 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 CDHR4A6H8M9 788 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 TMEM247A6NEH6 219 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 CD8AP01732 235 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 GPIP06744 558 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 GKN3PP0CG01 181 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 ZCCHC18P0CG32 403 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 ACVR1BP36896 505 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 DSTNP60981 165 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 TGFBR3Q03167 851 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 CEACAM7Q14002 265 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLC17A1Q14916 467 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 LARS2Q15031 903 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 GABRA6Q16445 453 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 ZSWIM7Q19AV6 140 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLC9B1Q4ZJI4 515 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 DTX2Q86UW9 622 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 CADM2Q8N3J6 435 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 TPT1P8Q9HAU6 139 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 SDR39U1Q9NRG7 319 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLC6A13Q9NSD5 602 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 THUMPD1Q9NXG2 353 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 FLVCR1Q9Y5Y0 555 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 USH1CQ9Y6N9 552 aa19.6■□□□□ 0.73
TRAPPC4-210ENST00000531290 M0R1B8 84 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 UBDO15205 165 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 IGHV4-39P01824 125 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 BCHEP06276 602 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 TFPTP0C1Z6 253 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 CD40P25942 277 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 MAPK11Q15759 364 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 C6orf10Q5SRN2 563 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 OTUD3Q5T2D3 398 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 C9orf135Q5VTT2 229 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 WBP2NLQ6ICG8 309 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 MSANTD1Q6ZTZ1 278 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 MAPK1IP1LQ8NDC0 245 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 SLC38A5Q8WUX1 472 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 ARMC7Q9H6L4 198 aa19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 FN1P02751 2386 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-210ENST00000531290 TGDSO95455 350 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 ITGA5P08648 1049 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 NCF2P19878 526 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 PTNP21246 168 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 POLR2JP52435 117 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 MVDP53602 400 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 FOXG1P55316 489 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 OR7A5Q15622 319 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 TSPO2Q5TGU0 170 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 ZNF836Q6ZNA1 936 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 MIER2Q8N344 545 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 ADAD1Q96M93 576 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 OR52B2Q96RD2 323 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 DHRS9Q9BPW9 319 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 SF3B5Q9BWJ5 86 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 TAPBPLQ9BX59 468 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 C1QTNF6Q9BXI9 259 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 SLC7A10Q9NS82 523 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 DCTN4Q9UJW0 460 aa19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 ZNF443Q9Y2A4 671 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC4-210ENST00000531290 HIVEP2P31629 2446 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 DSPPQ9NZW4 1301 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 A0A0G2JPF8 293 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 LIPT2A6NK58 231 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 HNRNPCL2B2RXH8 293 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 HNRNPCL3B7ZW38 293 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 E7EQL1 145 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 POLR3GO15318 223 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 HNRNPCL1O60812 293 aaKnown RBP19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 NDUFS7O75251 213 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 AKR7A3O95154 331 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 TP53P04637 393 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 HNRNPCL4P0DMR1 293 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 TTKP33981 857 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 ACAA2P42765 397 aaKnown RBP19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 NRF1Q16656 503 aa19.57■□□□□ 0.72
TRAPPC4-210ENST00000531290 TMEM225Q6GV28 225 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms