RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 SLC25A3Q00325 362 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 MAD2L1Q13257 205 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-211ENST00000528484 SLC17A1Q14916 467 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 EFNB3Q15768 340 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 MST1LQ2TV78 715 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 PGS1Q32NB8 556 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 SHQ1Q6PI26 577 aaKnown RBP10.07□□□□□ -0.8
CMTM1-211ENST00000528484 PAQR6Q6TCH4 344 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 RINLQ6ZS11 566 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 GPAT4Q86UL3 456 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 NOA1Q8NC60 698 aaKnown RBP10.07□□□□□ -0.8
CMTM1-211ENST00000528484 OR4A15Q8NGL6 344 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 MZB1Q8WU39 189 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 XAGE5Q8WWM1 108 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 TMEM45BQ96B21 275 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 COQ8BQ96D53 544 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 ANKRD27Q96NW4 1050 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 SNX18Q96RF0 628 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 C1orf50Q9BV19 199 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 SF3B5Q9BWJ5 86 aaKnown RBP10.07□□□□□ -0.8
CMTM1-211ENST00000528484 GATA5Q9BWX5 397 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-211ENST00000528484 PPCSQ9HAB8 311 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 TMED7Q9Y3B3 224 aa10.07□□□□□ -0.8
CMTM1-211ENST00000528484 NPHS1O60500 1241 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 SLU7O95391 586 aaKnown RBP10.06□□□□□ -0.8
CMTM1-211ENST00000528484 GUSBP08236 651 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 TACSTD2P09758 323 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 IFNGR1P15260 489 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 KRT4P19013 534 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 GIFP27352 417 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 NTF4P34130 210 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 KHKP50053 298 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 KCNJ10P78508 379 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 H3F3AP84243 136 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 GPAT3Q53EU6 434 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 OTUD3Q5T2D3 398 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-211ENST00000528484 EMBQ6PCB8 327 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 GLCCI1Q86VQ1 547 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 ADGRG3Q86Y34 549 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 C17orf53Q8N3J3 647 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-211ENST00000528484 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 KRTCAP2Q8N6L1 136 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-211ENST00000528484 C3orf56Q8N813 242 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 FAM71CQ8NEG0 241 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 VPS37AQ8NEZ2 397 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 OR9K2Q8NGE7 335 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 SGMS2Q8NHU3 365 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 AGR3Q8TD06 166 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 ZNF418Q8TF45 676 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-211ENST00000528484 WDR60Q8WVS4 1066 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 AURKBQ96GD4 344 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-211ENST00000528484 C1orf159Q96HA4 380 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 TAPBPLQ9BX59 468 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 SAP130Q9H0E3 1048 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 OR51I1Q9H343 314 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 PLK3Q9H4B4 646 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 PIF1Q9H611 641 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 KCNE5Q9UJ90 142 aa10.06□□□□□ -0.8
CMTM1-211ENST00000528484 CENPVL1A0A0U1RR11 272 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 SMIM23A6NLE4 172 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 B4DSR2 109 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 hCG_2039718K7EN88 272 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 RNASET2O00584 256 aaKnown RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 WIPF1O43516 503 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 SCN2BO60939 215 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 VAMP5O95183 116 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 OR12D1P0DN82 309 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 CXCR1P25024 350 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 CHI3L1P36222 383 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 ANXA11P50995 505 aaKnown RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 DVL1P1P54792 670 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 CDH15P55291 814 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 SH3BGRP55822 239 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 NAAAQ02083 359 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 ADIPOQQ15848 244 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 C3orf36Q3SXR2 165 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 TBRG1Q3YBR2 411 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 C6orf136Q5SQH8 315 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 TMEM225Q6GV28 225 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 TYW3Q6IPR3 259 aaKnown RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 TNFAIP8L2Q6P589 184 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 CMIPQ8IY22 773 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 UBASH3BQ8TF42 649 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 ROPN1LQ96C74 230 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 TUBGCP3Q96CW5 907 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 C16orf45Q96MC5 204 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 METTL17Q9H7H0 456 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-211ENST00000528484 GRIP1Q9Y3R0 1128 aa10.05□□□□□ -0.8
CMTM1-211ENST00000528484 TMEM233B4DJY2 109 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 LGI1O95970 557 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 CHRNGP07510 517 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 HOXB1P14653 301 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-211ENST00000528484 CREB1P16220 341 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 NPR2P20594 1047 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 UQCRC2P22695 453 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 TACR3P29371 465 aa10.04□□□□□ -0.8
CMTM1-211ENST00000528484 SERPINB5P36952 375 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms